Mesorhizobium sp. WSM4906: QAZ22_01055
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Entry
QAZ22_01055 CDS
T10806
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mewm Mesorhizobium sp. WSM4906
Brite
KEGG Orthology (KO) [BR:
mewm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mewm03019
]
QAZ22_01055 (hrpB)
Enzymes [BR:
mewm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QAZ22_01055 (hrpB)
Messenger RNA biogenesis [BR:
mewm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QAZ22_01055 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
DUF6630
ResIII
AAA_22
AAA_30
AAA_19
HA2_N
AAA_16
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WFP76471
LinkDB
All DBs
Position
complement(227197..229659)
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AA seq
820 aa
AA seq
DB search
MRMKPLPELPVTAVLPALGQTLAGRNSAVLVAPPGAGKTTLVPLALLDAPWLGAGRIVLL
EPRRLAARAAARRMAELLGEEPGGTVGYAMRMENRTSARTKILVVTEGVLSRMILDDPEL
PGVSAVIFDEFHERSLDGDFGLALALDVQGALRPDLRLLVMSATLDGARVARLLSGAPVI
ESEGRAFPVDIRYDERPAGMAVEDAMAKAVRFALGTEQGSVLAFLPGKREIERTAERLEG
NVAADTDIVPLYGQLDNRMQDAAIKPAPPGRRKVVLATSIAETSITIDGVRVVIDSGLSR
LPRYEPASGLTRLETVRVSRASADQRAGRAGRTQPGVAIRLWRAEQTAALPVFTPPEILE
ADLSGLLLDCAAFGVADPTSLSFLDPPPVPALNEARVLLEALHAIDTAGRLTEAGAAMRK
LALPVRLAHMVAEAAKTGQALEAATLAVLLTERGLGGDSADLERRLMRFRTEKSSRANAA
RQLAERLARQAGGRKADTPAAAGALLIHAWPDRVARARGERGRFVLANGSGAMVDAADPL
AGETWLVVADLQGKAQNARITAAAPVDEADIRGALANRIETKREANFDRERRAVRVRETA
RLGAITLSERMLPAPSGADADRAILDALREHGLALLDWGKEAETLRQRLGWLHRGLGAPW
PDVSDQVLIDRLDDWLLPFLAGEASFAAIEPATLAAGLMSLVPHELQRKVDALAPTHFGA
PSGSHVPIRYDGEWPVLEIRVQELFGLDKHPAIAGGTVPLTLELLSPAHRPIQTTRDLPG
FWRGSWADVRADMRGRYPKHVWPENPLLAAATSRAKPRGT
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaaacccttgccggaacttccggtcacagccgtgctgccggcgctcgggcaa
acacttgccgggcgcaacagcgccgtgcttgtggcgccgcccggcgccggcaagacgacg
ctggtgccgctggcgctgctcgacgcgccctggctcggcgcgggccggatcgtgctgctc
gagccgcgccggctcgccgcccgcgccgccgcgcgccgcatggccgagctgctcggcgag
gagcccggcggcacggtcggctatgcgatgcgcatggagaaccgcacctcggcgcggaca
aaaatcctcgtcgtcaccgaaggcgtgctgtcccgcatgatcctcgacgatccggaactg
cccggcgtttcggcggtgatcttcgacgaattccacgagcgctctctcgacggcgatttt
gggctggcgctggcgctcgacgtgcagggggcgttgcggccggatctgcgcctgctggtc
atgtcggcgacgctcgacggcgcgcgcgtcgcgaggcttctttccggagcgccggtgatc
gagagcgagggccgagccttcccggtcgacatccgctatgacgagcggccggccggcatg
gccgtcgaggacgccatggccaaggcggtccgtttcgctcttggcacggagcagggcagc
gtgctcgcttttctgccgggaaagcgcgagatcgagcgcacggccgagcggctcgaaggc
aacgtcgcggctgacaccgatatcgtcccgctctacggccaattggacaacaggatgcag
gacgcggcaatcaagccggccccgcccggccgccgcaaggtggtgctggcgacgtcgatc
gccgagacctccatcaccatcgacggcgtgcgcgtcgtcatcgattccggcctgtcgcgc
ctgccgcgctatgagccggcgagcggcctgacgagactggagaccgtgcgcgtcagcaga
gcttccgccgaccagcgcgccggccgcgccgggcgaacgcagccaggcgtcgccatccgg
ctgtggcgcgccgagcagacggcagcactcccggtcttcacgccgccggaaatcctcgag
gccgacctttccggcctgctgctcgactgcgccgctttcggcgtagcggatccgacgagc
ctctcattcctcgatccgccgccggtgcccgcgctcaacgaggcgcgggtgctgctcgag
gcgctgcacgccatcgacactgccggtcgcttgacggaggcgggcgcggcgatgcgcaag
ctggcgctgccggtgcggctcgcgcatatggtggcggaagcggcaaagacgggccaggcg
ctggaagcggcgacgcttgccgtgctgctcaccgagcgcgggcttggcggcgacagcgcc
gacctcgaacgccgattgatgcgctttcgcaccgaaaaatcgtcgcgcgccaatgccgcc
cggcagcttgccgagcgcctggccaggcaggctggcggccgaaaggccgacacgccggcc
gcggccggtgcgttgctgatccatgcctggccggaccgcgtcgcgagggcgcgcggcgaa
cgcggccgcttcgtgctcgccaacggttccggcgcgatggtcgacgccgccgatccgctc
gctggcgagacctggctggtcgtcgccgaccttcagggcaaggcgcagaacgcccgcatc
accgccgccgcgcccgtcgacgaggccgatatccgcggggcgctcgccaaccgcatcgag
acgaaacgggaagccaacttcgaccgcgagcgacgcgccgtgcgtgtgcgcgagactgca
cgcctcggcgccatcacgctttccgagcgcatgctgccggcgccgtcgggcgccgatgcc
gaccgcgccatcctcgatgccttgcgcgagcatggcctggcgctgctcgactggggcaag
gaggcggagacgctgcgccagcggctcggctggctccatcgcggcctcggcgcgccctgg
ccggacgtctcggaccaggtgcttatcgatcggctcgacgactggctgctgccgttcctt
gccggcgaggcctctttcgcggcgatcgagccggccacgctcgcggccggcttgatgtcg
ctggtcccgcacgagctgcagcgcaaggtcgatgcgttggcgccgacccatttcggcgcg
ccttcgggcagccatgtgccgatccgatatgacggcgaatggccggttctggagatccgc
gtgcaggagttgttcggcctcgacaagcatccggcgatcgccggcggcacggtgccgctg
acgctcgagctgttgtcgccggcgcaccgcccgatccagacgacacgcgatctgcccggc
ttctggcgcggctcctgggcggacgtgcgcgccgacatgcgcggtcgctatcccaagcat
gtctggccggaaaacccgctgcttgccgccgccaccagccgcgccaagccgcgcgggacg
tag
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