Mesorhizobium sp. WSM4906: QAZ22_04425
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Entry
QAZ22_04425 CDS
T10806
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mewm Mesorhizobium sp. WSM4906
Pathway
mewm03018
RNA degradation
Brite
Enzymes [BR:
mewm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QAZ22_04425
Messenger RNA biogenesis [BR:
mewm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QAZ22_04425
Ribosome biogenesis [BR:
mewm03009
]
Prokaryotic type
rRNA helicases
QAZ22_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WFP77101
LinkDB
All DBs
Position
complement(938451..940289)
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AA seq
612 aa
AA seq
DB search
MSSFETIVPALAEALQNRGYVELTAVQKAVLAPGLGAADALVSAQTGSGKTVAFGLALAP
SLLGGAERFAAAGAPLGLVVAPTRELALQVRRELEWLYALTGATVASCVGGMDMRGERRA
LERGAHIVVGTPGRLRDHISRGALDMSALKAVVLDEADEMLDLGFREDLEFILDAAPAER
RTLMFSATVPRSIATLAKSYQRDAVRISAGSAEKQHLDIEYRALSVAPADRENAIINVLR
YYEATNAMVFCNTRAAVNHLTARFNNRNFSVVALSGELSQNERSHALQAMRDGRARVCIA
TDVAARGIDLPNLDLVIHADLPTNPETLLHRSGRTGRAGRKGVSALIVPGNARRRTERLL
ANAGLTATWASPPSADEVLRRDDERILADPAFDEPVKDKERDFATALLERHGAELVAAAF
VRLCRGSRSAPEDLLDVAPFAPSKEKFARRDEAPGRRDDFGDSVWFSLSVGRRQNAEPRW
LIPMLCRTGNISKREIGAIKMQPEETFVQVAADWADRFLAAIGPDRKLQGSIAVKRLDGT
PDLSRAGYQPPKPEKKPHRGKRAFDQNAPKFEKRAPGEHRPVGTAESKPWAKKPSKAKFD
KPAKHKKAKRPG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttcgaaacgatcgtgcctgcgctggcggaggcgctgcaaaatcgcggctat
gtcgagctgaccgccgtccagaaggcggtgctggcgccagggctgggcgcggccgacgcg
ctggtttcggcccagaccggctccggcaagacggttgccttcggccttgccctggcgccg
agcctgctcggcggcgcagaacgcttcgccgccgccggcgcgccgctggggctggtcgtg
gcgccgacccgggaattggcgctgcaggtgcggcgcgagctggaatggctctacgcgctg
accggcgcgaccgtagcgtcgtgcgtcggcggcatggacatgcgcggcgagcggcgcgcg
ctggagcgtggcgcccacatcgtcgtcggcacgcccggccggctgcgcgaccatatcagt
cgcggcgcgctcgacatgtcggcgctgaaggccgtggtgctggacgaggccgacgagatg
ctcgacctcggcttccgcgaggacctcgaattcatcctcgacgccgcgcccgccgagcgg
cgcacgctgatgttttccgccaccgtgccgcgctccatcgccacgctggcgaagagctac
cagcgcgacgccgttcgcatctccgccggcagtgcggaaaagcagcatctcgacatcgaa
taccgggcgctctccgtcgcgccggccgatcgcgagaacgccatcatcaacgtgctgcgc
tactatgaggccaccaacgcgatggtgttctgcaacacccgcgccgccgtcaaccatctc
accgcgcgcttcaacaaccgcaatttctccgtcgtggcgctttccggcgagctcagccag
aacgagcgcagccacgcgctgcaggcgatgcgcgacggccgcgccagggtctgcatcgcc
accgacgtggcagcgcgcggcatcgacctgcccaatctcgacctggtcatccacgccgac
ctgccgaccaatccggagacgctgctgcatcgcagcggccgcaccgggcgcgccggacga
aaaggtgtcagcgcgctgatcgtgccgggcaacgcccgccgtcgcaccgagcggctgctt
gccaatgccggcctgaccgcgacctgggcgagcccgccctcggccgacgaggtgctgagg
cgcgacgacgaacgcatcctggccgacccggctttcgacgagccggtgaaggacaaggag
cgtgacttcgccacggcgcttctcgagcggcatggcgccgaactggtggccgccgccttc
gtgcggctctgccgcggcagccgctcggcgcccgaggacctgctcgacgtcgcgccgttc
gcgccgtcgaaagaaaagttcgcgcgcagggacgaagcacccggccgccgcgacgatttc
ggcgacagcgtctggttctcgctgtcggtgggacgccggcagaatgccgaaccgcgctgg
ctgatcccgatgctgtgccgcaccggcaacatctccaagcgcgagatcggcgccatcaag
atgcagccggaggaaaccttcgtgcaggtcgcggccgactgggccgaccggttcctcgcg
gcgatcggccccgaccgcaaactgcagggcagcatcgcggtgaagcggctggacggcacg
ccggacctttcgagagccggctaccagccgccgaagccggagaagaagccgcatcgcggc
aagcgtgctttcgatcagaacgcgcccaagttcgagaagcgcgcgccgggcgagcatcgg
cccgtcggcacggcggagtcaaagccctgggcgaagaagcccagcaaggcgaagttcgac
aagccggcaaagcacaagaaggcgaagcggcctggctga
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