Mesorhizobium sp. WSM4906: QAZ22_12115
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Entry
QAZ22_12115 CDS
T10806
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mewm Mesorhizobium sp. WSM4906
Brite
KEGG Orthology (KO) [BR:
mewm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mewm03032
]
QAZ22_12115
03400 DNA repair and recombination proteins [BR:
mewm03400
]
QAZ22_12115
Enzymes [BR:
mewm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QAZ22_12115
DNA replication proteins [BR:
mewm03032
]
Prokaryotic type
DNA Topoisomerases
QAZ22_12115
DNA repair and recombination proteins [BR:
mewm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QAZ22_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SnAC
DUF1870
Motif
Other DBs
NCBI-ProteinID:
WFP78496
LinkDB
All DBs
Position
2547085..2548176
Genome browser
AA seq
363 aa
AA seq
DB search
MLQRSHPSPGRSASADEARENGAQNSAERASLSYVSDADPGIRRLRKGKGFRYVDPNGKP
VTAPTLDRIKAIVIPPAWTDVWISPDPNGHIQATGRDQRRRKQYRYHPQWTEERDGVKFS
SLVAFAEALPNLRRRIDADLRRHGLPLERVVAAIVWLLDNTMIRIGNAAYARDNKSFGLT
TLRDRHVEITGSSLRFAFKGKSGKEWKLKLVDRRIAKIVRGAQDLPGQKLFQYLDEDGDR
RPLRSEDVNRYLREASGPEFSSKHFRTWGGTIHAVALFAQAELPESMTQRKRVMNGIVDK
VAERLGNTRAVCRRCYIHPLVFEAWAQGTLLSEMTEANKRKRLIPGLDEEETLVLRWLEA
RGA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcgatcacacccgtcccccggccgttcggctagcgcggacgaagcccgcgag
aacggtgcgcaaaattcggccgagcgcgcgtcgctcagctatgtcagcgatgccgatccc
ggcattcgccgattgagaaaaggtaagggatttcgttacgtcgacccgaacgggaaaccg
gtgaccgcaccgacgcttgaccgcatcaaggcgatcgtcatcccgccggcgtggaccgat
gtgtggatctcgcccgatccgaacggccatatccaggcgaccggccgggatcaacgccga
cgcaagcagtaccgctatcacccgcaatggacggaggaacgggacggcgtcaaattttcc
agtcttgtcgcttttgccgaggcgctgcctaacctccggcgccggatcgatgccgacctg
cggcggcacgggctgccgctggaacgtgtagtcgctgcgatcgtttggctgctcgacaac
accatgatccgcatcggcaatgccgcctatgcccgcgacaacaagagtttcggcctaacc
actctgcgcgaccgccatgtcgaaatcaccggctccagcctgcgcttcgccttcaagggc
aaatccggcaaggaatggaagctgaagctggtcgatcgccgcatagcaaagatcgtgcgc
ggcgcgcaggacctgcccggccagaaattgttccaatatctcgacgaagacggcgatcgg
cggccgttgcggtcggaggacgtcaaccgctacctccgcgaggcgtccggcccggagttc
agctccaagcatttccgcacctggggtggcaccattcatgcggtagcgctgtttgcgcaa
gcggagctcccagaaagcatgacccagcgaaagcgggtgatgaacggcatcgtcgacaag
gttgctgaacggctcggcaacacgcgagccgtctgccgccggtgctacatccacccgctc
gtcttcgaggcgtgggcgcaaggcacgctgctcagcgaaatgaccgaggccaacaagcga
aagcgtctcataccgggcctcgacgaggaggagacgctggtgctcagatggctcgaggcg
cgcggagcctga
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