Mesorhizobium sp. WSM4906: QAZ22_21365
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Entry
QAZ22_21365 CDS
T10806
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mewm Mesorhizobium sp. WSM4906
Brite
KEGG Orthology (KO) [BR:
mewm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mewm03009
]
QAZ22_21365 (rimO)
Enzymes [BR:
mewm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QAZ22_21365 (rimO)
Ribosome biogenesis [BR:
mewm03009
]
Prokaryotic type
ribosomal protein modification factors
QAZ22_21365 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WFP74280
LinkDB
All DBs
Position
4453161..4454474
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AA seq
437 aa
AA seq
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MSAPRVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSARDESL
NAIGSALSENGRVIVTGCLGAEPEVIREKHPNVLAITGPQAYESVMAAVHEAAPPSHDPY
VDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAKAG
VREILVISQDTSAYGIDIKYQTSLFGDREVRAKFLDLAEELGRLGIWIRMHYVYPYPHVA
DVIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGEKTLERIRGWREICPDLAIRSTFI
VGFPGETEDDFQMLLDWLDEAKIDRAGCFKYEPVKGARSNELGLEQVPQEIKEARWHRFM
QRQQKISATQLAKKVGKRLPVLIDEAHGTSAKGRTKYDAPEIDGSVHIQSRRPLRAGEIV
TVKIDRADAYDLYGSAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccacgcgtcagtttcgtcagtcttggttgcccgaaggcgctcgtcgattcc
gagcgcatcatcacgcggctccgcgccgagggctacgagatcgcgcgcaagcatgacggc
gccgatctcgtcgtcgtcaacacgtgcggcttcctcgattcggcgcgtgacgagtcgctc
aacgccatcggctccgccctttccgaaaacggccgcgtcatcgtcaccggctgcctcggc
gccgagccggaggtcatccgcgagaaacaccccaatgtgctggcgatcaccggcccgcag
gcctatgagagcgtgatggctgcggtgcacgaggccgctccgccgagccacgacccgtac
gtcgatcttctgccgccgcagggtgtgaagctcacgccgcgccattacgcctatctgaag
atatcggagggctgcaacaaccgctgcaccttctgcatcatcccggcgctgcgcggcgac
ctcgtctcccgcccggcggcggacgtgctgcgcgaggccgaaaagctcgccaaggccggc
gtcagggaaatcctcgtcatctcgcaggacaccagcgcctacggcatcgacatcaagtac
cagacgagcctgttcggcgatcgcgaggtgcgggcgaaattcctcgacctcgccgaggag
cttggccggctaggcatctggatacgcatgcactatgtctacccctacccccatgtcgcc
gacgtcattccgctgatggcggagggaaaaatccttccctatctcgacatcccttttcag
catgcctcgccgcaggtgctgaagaacatgcgccgtcccgcccatggcgaaaagacgctg
gagcgcattcgcggctggcgcgagatctgcccggaccttgccatccgttcgaccttcatc
gtcggcttccccggcgagaccgaggacgatttccagatgctgctcgactggctggacgag
gcgaaaatcgaccgcgccggctgcttcaaatacgaaccggtcaagggcgctcgctccaat
gagctcggcctcgaacaggtgccgcaggagatcaaggaagcgcgctggcaccgcttcatg
cagcgccagcagaagatctcggcaacgcagttggccaagaaggtcggcaagcgcctgccg
gtgctgatcgacgaggcgcacggcacctcggcgaagggccgcaccaaatacgacgcgccc
gagatcgacggctccgtgcacatccagtcgcgccggccgctgcgcgccggcgagatcgtc
acggtcaagatcgaccgcgccgatgcttacgacctctacggctcggcggtatga
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