KEGG   Mesorhizobium sp. WSM4904: QAZ47_04095
Entry
QAZ47_04095       CDS       T10805                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mews  Mesorhizobium sp. WSM4904
Pathway
mews03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mews00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QAZ47_04095 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mews03021]
    QAZ47_04095 (rho)
   03019 Messenger RNA biogenesis [BR:mews03019]
    QAZ47_04095 (rho)
Transcription machinery [BR:mews03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     QAZ47_04095 (rho)
Messenger RNA biogenesis [BR:mews03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     QAZ47_04095 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 S1CSD-TOTE-2 AAA_22
Other DBs
NCBI-ProteinID: WFP63772
LinkDB
Position
867961..869226
AA seq 421 aa
MQEMKLAEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLATQDIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
SINFDDPEKIRHKIHFDNLTPLYPTSRLKMEVDNPTSKDISPRVIDLVAPIGKGQRALIN
AQPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAA
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPA
IDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactcgcagagttcaagaacaagaagccgccggagctgatcgcctac
gccgaatcgctcgaggtggagaacgccagcgtcatgcgcaagcaggagctgatgttcgcg
atcctgaagaagctcgccacccaggacatcgagatcatcggcgacggcgtggtcgaggtg
ttgcaggacggtttcggtttcctgcgctcggccaatgcaaactacctgccaggtcccgac
gacatctatatctcgccctcgcaaataaggcgcttttcgctgaagaccggcgataccgtc
gaaggaccgatccgcagcccgaaagagggcgagcgctatttcgcgctgctcaaggtcaac
tcgatcaatttcgacgacccggaaaagatccggcacaagatccatttcgacaatctgacg
ccgctctacccgacctcgcggctgaagatggaggtcgacaatcccaccagcaaggacatc
tcgccacgcgtgatcgacctggtcgcgccgatcggcaaggggcagcgcgcgttgatcaat
gcgcagccgcgaaccggcaagacggtgctgttgcagaacatcgcgcattcgatcaccgcc
aaccatccggaatgctacctgatcgtgcttctgatcgacgagcgtccggaggaagtcacc
gacatgcagcgctcggtgaagggcgaggtgatctcctcgaccttcgacgagccggctgcg
cgccacgtccaggtcgccgagatggtgatcgagaaggccaagcgcctggtcgaacacggc
cgcgacgtcgtcatcctgctcgattcgatcacgcgtctcggccgcgcctacaacaccgtc
gtgccgtcgtccggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcggccg
aagcgcttcttcggcgccgcccgcaacatcgaggagggcggctcgctcaccatcatcgcc
acggcgctgatcgataccggcagccgcatggacgaagtgatcttcgaagagttcaagggc
accggcaactgcgaaatccagctcgaccgcaaggtggccgacaagcgcatctatccggcg
atcgacatcctcaaatccggcacccgcaaggaagacctgctggttccgcggcaggacctg
cagaagatcttcgtactgcgccggattctcgcgccgatgggaacgaccgacgcgatcgag
ttcctcatcgacaagctcaagcagaccaagaccaacgccgacttcttcgattcgatgaat
acgtga

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