Mesorhizobium sp. WSM4904: QAZ47_20825
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Entry
QAZ47_20825 CDS
T10805
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mews Mesorhizobium sp. WSM4904
Pathway
mews03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mews00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QAZ47_20825 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mews03021
]
QAZ47_20825 (rpoC)
03400 DNA repair and recombination proteins [BR:
mews03400
]
QAZ47_20825 (rpoC)
Enzymes [BR:
mews01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QAZ47_20825 (rpoC)
Transcription machinery [BR:
mews03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QAZ47_20825 (rpoC)
DNA repair and recombination proteins [BR:
mews03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QAZ47_20825 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RnfC_N
Phage_cement_4
Motif
Other DBs
NCBI-ProteinID:
WFP60933
UniProt:
A0AAJ6CWY8
LinkDB
All DBs
Position
4342795..4346991
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKLLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHAKIKGRFRTVDAEGKVVSKIYDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFAHACRAGISFGKDDMVIPDTKLKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEENGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSLDCGTDKGLTMQPIVDAGQIVASVGQRVLGRTA
LDDINHPVSGELLVKAGKLMDERDVEQIEKAGVQSVRIRSALTCEVRTGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVAYGSRIFVDDGDKVKRGQRIAEWDPYTR
PILTEIEGKVAFEDLVDGISVQETADESTGITKREVIDWRSTPRGSDLKPAIVVQDAKGK
VGKLSKGGDARFLLSVEAILSVEPGAHVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIVIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TAQGDSTYIPGDHVDVIELEEVNERLIEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEVAEPMLTNMVNAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaacccccaggcgcctgcgcaggtgttcgattcc
atccggatctcgcttgccagccccgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgtgacggtctgttctgcgcg
cgcatttttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaagtcacgctgtcgcgcgtccgccgc
gagcgcatgggccatatcgagctcgccgcgcccgtcgcccacatctggttcctgaagtcg
ctgccctcgcgcatcggcacgctgctcgacatgacgctgaaggacatcgagcgtgtgctt
tacttcgagaactacatcgtcaccgagcccggcctcaccgcgctgaaggagcaccagctg
ctcagcgaggaagagtacatgctggccgtcgacgagtatggcgaggattccttcaccgcc
atgatcggcgccgaagccatccatgacctgctcgccggcatggacctggagaagatcgcc
ggcgacctgcgctccgagctggcttcgaccacgtccgagctcaagcagaagaagctcttg
aaacggctcaaggtcgtcgagaacttcatggaatccggcaaccgcccggaatggatgatc
atgaaggtggttccggttatcccgccggatcttcgcccgctcgtcccgctggacggcggc
cgcttcgcgacgtccgacctcaacgacctctatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgcctggcatcatcgtgcgcaacgaaaagcgcatg
ctgcaggaggccgtcgacgcgctcttcgacaacggtcgccgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgctcggtcatcgtgaccggt
ccggagctcaagctgcatcagtgcggcctgccgaagaagatggcgctcgaactcttcaag
cccttcatctacgcccgcctcgacgccaagggtttctcctcgacggtcaagcaggcgaag
aagctggtcgagaaggagcgtccggaggtttgggatatcctcgacgaggtcatccgcgag
catccggtgctgttgaaccgcgcgccgacgctgcaccgcctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcatccgctggtctgcacggccttcaac
gccgacttcgacggtgaccagatggcggtccacgtgccgctgtcgctggaagcgcagctc
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcctccggcgcgccg
atcatcgtgccgtcgcaggacatggttctcggtctctactatctgtcgatcgtcaaccag
aacgagccgggcgaaggcatggtgttcgccgacatgggcgagctccagcatgcgctggag
accaaggccgtcacgctgcacgccaagatcaagggtcgcttccgcacggtcgatgccgaa
ggcaaggtcgtgtcgaagatctacgacaccacgcctggccgcatgatcatcggcgagctt
ctgccgaagaacgtcaacgtgccttatgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccactgcggccagaaggagacggtcatcttc
tgcgatcgcatcatggccctcggcttcgcccatgcctgccgcgccggcatttcgttcggc
aaggacgacatggtgatcccggacaccaagctgaagctggtctccgacaccgaggctttg
gccaaggagtacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggtggtcgacgcctgggccaagtgctcggaaaaggtcgccgacgagatgatggcccgc
atcaaggcggtcgagttcgaggaaaacggccgtcagaagccgatgaactcgatctacatg
atgtcgcattcgggtgcgcgcggttcgcccacccagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccttcgggcgagatcatcgagacgcccatcatctcgaacttcaag
gaaggccttaccgtgctcgagtacttcaactcgacccacggcgcccgcaagggtctggcc
gacactgcgttgaagacggcgaactcgggttacctgacccgccgtctggtcgacgtggcg
caggactgcatcgtcaattcgctggattgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggccagatcgtcgcctcggtcggtcagcgcgtgctgggccgcacggcg
ctcgacgacatcaaccacccggtctccggcgaattgctggtcaaggccggcaagctgatg
gacgagcgcgacgtggagcagatcgagaaggccggcgtgcagtcggtgcgcatccgctcg
gcgctgacctgcgaggtcaggaccggcgtctgcgcggtctgctatggtcgcgatcttgcc
cgcggcacgcccgtcaaccagggcgaggctgtcggcgtcatcgctgcgcagtcgatcggc
gagccgggcacccagctcaccatgcgcaccttccacatgggcggcaccgcgcaggtggtg
gactcttcgttccttgaagcctcctatgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtcctgatcctc
gacgaggccggcaaggagcgcgccacgcaccgcgtcgcctatggctcgcgcatcttcgtg
gacgatggcgacaaggtgaagcgcggccagcgcatcgccgagtgggatccttatacccgc
ccgatcctcaccgaaatcgagggcaaggtggcgttcgaggatctggtcgacggcatttcc
gttcaggagacggccgacgaatcgaccggcatcaccaagcgcgaggtcatcgactggcgc
tcgacgccgcgcggcagcgacctgaagccggcgatcgtcgtccaagacgccaagggcaag
gtcggcaagctgtcgaagggcggcgatgcgcgcttcctgctctcggtcgaggccatcctc
tcggttgagccgggcgcgcatgtccgtccgggcgacgtgctggcgcgtatccccatggaa
agcgccaagaccaaggacatcaccggtggtctgccgcgcgttgccgaactgttcgaggct
cgccgtccgaaggaccacgccatcatcgccgagatcgatggcacgatccgcttcggccgc
gactacaagaacaagcgtcgcatcgtcatcgagccgcatgactcgacgctggagccggtc
gagtacctgatcccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaatccggcgccgcatgacatcctggcgatcaagggcgtg
gaggcgcttgcgtcctacctcgtcaacgagatccaggaggtctaccgcctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accgcgcagggcgactcgacctacattcctggcgaccacgtcgacgtgatcgagctggaa
gaggtcaacgagcgcctgatcgaggacggcaagaagccggccgaaggtcagccggtgctg
ctcggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgaccagggtgctgaccgaggccgcggttgccggcaagaccgacatgctgcagggt
ctgaaggaaaacgtcatcgtcggccgtctgatcccggccggcaccggcggcacgatgagc
cagatccggcgcatcgccacctcgcgcgacgagctgatcatcgacgagcgccgcaaggcg
tccggcgtcgaggtcgccgagccgatgctgaccaacatggtcaacgccgcgcagtaa
DBGET
integrated database retrieval system
