Methylorubrum extorquens PA1: Mext_0124
Help
Entry
Mext_0124 CDS
T00640
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex00061
Fatty acid biosynthesis
mex00071
Fatty acid degradation
mex01100
Metabolic pathways
mex01212
Fatty acid metabolism
mex02024
Quorum sensing
mex04146
Peroxisome
Module
mex_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Mext_0124
00071 Fatty acid degradation
Mext_0124
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Mext_0124
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mext_0124
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mex01004
]
Mext_0124
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mex04147
]
Mext_0124
Enzymes [BR:
mex01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Mext_0124
Lipid biosynthesis proteins [BR:
mex01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Mext_0124
Exosome [BR:
mex04147
]
Exosomal proteins
Exosomal proteins of breast milk
Mext_0124
Exosomal proteins of breast cancer cells
Mext_0124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABY28552
LinkDB
All DBs
Position
complement(133225..134925)
Genome browser
AA seq
566 aa
AA seq
DB search
MDFRPTDMSNVWLTAYDRGVPEHVEVAQFSSLVDMFERTVERFQERPAFSNMGRVITYGA
LDEASARLAHHLRNVLGLQPGERVAIMLPNLLQYPIAFFGVIRAGLVVVNVNPLYTAPEL
EHQLRDSGACTIIVLENFCATLQVALRTVDVPNVIVTRVGDELARPKAILTDLVVRHVRR
LIPRWHIAGAMQWRRILSVRVKPNLPQVETGLNDIALLQYTGGTTGGAKGAVLTHGNVLA
NALILGAWFAAVGTHKGEKYLVALPLYHALALICQVVNRFILGGCGVLITNPRDLNGLVA
EMRRHRFRSLAGVPSLFQALAQHPDIGKVDFSETVACCSGGAPLPLVVAEVWKSATGLTI
VDGYGLTEAAGVAVMNPLGARPQRSGIGVPVCSTEIEIRREDGSVAASDEPGEIYVRGPQ
VMRGYHNQPEETARAIDAGGFLATGDIAAMGRDGYLTLIDRKKDMAIVGGFNVFPSEVDD
VLLRHPGIREAAVVAVPDAHSGEAILACVVRQNPHLTEAEVIAHARASLTGYKVPRRVVF
LDVLPKTPVGKVLRRVLRDALVEPGQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggattttaggccgactgatatgagcaacgtatggctcacagcgtatgaccgcggcgtt
ccggagcatgtcgaggtcgcgcagtttagctcactcgtcgatatgttcgagcgcacagtc
gagcgcttccaggagcgaccggcctttagcaacatgggtcgcgtgatcacctatggcgca
ctcgatgaggcatccgctcgactggctcaccacctgcggaacgtccttgggctgcagccc
ggcgaacgggttgcgatcatgcttccaaacctactgcagtacccgatcgccttctttggt
gtgatccgggccggtctcgtcgtcgtcaacgtgaacccactctacaccgcccccgagctg
gagcatcagctgcgcgacagcggcgcgtgcacgatcatcgtcctcgagaacttctgcgca
acgctgcaggtagccctccgcactgttgacgtgcctaatgtgatcgtcacgcgggtgggt
gacgaactcgcgcgaccgaaggcaatcctaacggatcttgtcgtacgccacgtccgcagg
ctcatcccacgctggcatatcgccggtgcaatgcagtggcgacgcatcctatccgtgcgc
gtcaaaccaaatctgccacaggtcgagacgggcctgaatgacatcgccctcctgcagtac
acaggaggtacaacgggtggcgcgaagggagccgttctcacgcatggaaacgtactggct
aacgcgctgatcctaggggcgtggtttgccgccgtcggaacccataagggcgaaaaatat
cttgtcgcacttccactctaccatgcccttgccctgatctgccaagtcgtcaaccgcttc
attctcggggggtgcggcgtgctgatcaccaatccgcgcgacctcaacggcttggtggcg
gagatgcgccggcaccgctttcgcagcctcgccggcgtgccgagcctcttccaagcgctc
gcgcagcaccctgacatcggcaaagttgattttagcgagactgttgcatgctgctccggc
ggagcgccactgccgttagtcgtcgccgaggtctggaagtccgcgacggggctgacgatc
gtcgacggttatggcctcactgaggcagcaggcgtagcagtgatgaacccgcttggcgcg
cggccacaacgtagcggaattggcgtaccggtctgctcgaccgagatcgaaatccgccgc
gaggacggctctgtcgcagcgtcagacgagcccggcgagatttatgtccgggggccgcag
gtgatgcgcggctatcacaaccagccagaggagaccgcccgcgccatcgacgcaggtggc
tttctcgcgacgggagacatcgcagcgatgggtagggatgggtacctcaccctcatcgat
cggaagaaggacatggcaatcgtcggcggcttcaatgtctttccaagcgaggtcgacgat
gtcctgttgaggcatcccggtatccgcgaagccgcggtggtcgcggtgccggacgctcac
tccggtgaggcgatactcgcctgcgtcgtaagacaaaatccgcatctaacggaagcggaa
gtgatcgcgcatgctcgcgcctccctcacgggctacaaggtgccgcgtcgggtcgttttt
ctcgatgttctccccaagacgccggtcggcaaggttctgcgccgtgtcctaagggatgcc
ctggttgagcccggtcagtaa
DBGET
integrated database retrieval system
