Methylorubrum extorquens PA1: Mext_0207
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Entry
Mext_0207 CDS
T00640
Name
(GenBank) ABC transporter related
KO
K03701
excinuclease ABC subunit A
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mext_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_0207
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mext_0207
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mext_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_25
AAA_16
Anti-TRAP
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABY28633
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Position
223664..226360
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AA seq
898 aa
AA seq
DB search
MDQVKPKERVRIARAGAGRPGYVTVKGAREHNLRDVDVEVPRDALVVFTGVSGSGKSSLA
FGTLYAEAQRRYFESVAPYARRMIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSV
TTLSSLVRMMYSRAGTYPPGQPMLYAEDFSPNTPQGACPSCGGLGRVYQATEASMVPDPS
LTIRERAVAAWPQAWGGQNLRDILVSRGVDVDTPWKDLPRALRDWILFTDDQPQEPVYAG
LSPEQTRLARRRRLEPSYMGTFTSARRHVLGTFTNSQSALMRRRAASYLVSEDCPVCQGK
RLKPEALSVTFAGLDIGELSRMPLADLAEAMRPAAEDRLPDEADGSAPDTLDRDTGLRDR
ARRAASGASAHAGAPDVRATPNLSIEKRLAAQRLAADLIDRIGTLTELGLGYLSLDRVTT
TLSSGELQRLRLATQLRSQLFGVAYVLDEPTAGLHPADGDAMHDALAGLLASGNSLFVVE
HDIGTMRRADWLVDVGPAAGEHGGTVLYSGPPEGLRDVEASRTRLHLFGMAEPPQRPRRE
PSGWLRLEGIVRNNLRGVSAAFPLGCLTAVTGISGSGKSSLVSQALLELVGDRLGRPVEI
DDEPEDPLDDAPGPTEGRIVGGMDGIRRLVKVDQKPIGRTPRSNLATYTGLFDAVRKLFA
ATPEARKRRYDAGRFSFNVAKGRCPACEGEGFVSVELLFMPSVYAPCPTCHGTRYAPDTL
EVTWNGLTIADVLGLTVERACDAFADEPSVLRPLAVLRDLGLGYLRLGQPATELSGGEAQ
RIKLATELQRGQRGGTLYVLDEPTTGLHPTDVDRLMLQLNGLVDAGNAVVMVEHDMRVVA
GADHVIDVGPGAGNLGGTVVAAGHPEDVAEARGSRTAPYLRDELMAYAGQESSPRLAG
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagtgaagcccaaggaacgggtcaggatcgctcgggccggcgcgggtcgacca
ggctacgtcacggtaaagggcgcccgcgagcacaatctgcgcgacgtcgacgtggaggtg
ccgcgcgacgccctcgtggtgttcaccggcgtctcgggctccggcaagtcttcgctcgcc
ttcggtacgctctacgcggaggcccagaggcgctacttcgaatcggtcgcgccctacgcg
cgccggatgatcgatcaggtcggggtgcccgacgtcgattccatcgaggggcttcccccg
gcggtcgccctccagcagcagcgcgggacgccgagcgcacgctcctcggtcggcagcgtc
accactctgtcgagccttgtgcggatgatgtattcgcgcgccggcacctacccgccgggc
cagccgatgctttacgcggaggacttctcgcccaacacgccccagggcgcctgcccctcc
tgcggcgggctcggacgagtctatcaggcgacggaagcgtcgatggtgccggacccctcg
ctgacgatccgcgagcgcgccgtcgcggcctggccgcaagcctggggcgggcagaacctg
cgggacatcttggtgagccggggcgtcgatgtcgacacgccctggaaggacctcccgagg
gcgttgcgcgactggatcctgttcacggacgaccagccgcaggagccggtctatgccggg
ctctccccggagcagacgcggctggcccgccggcgtcgcctggagccgagctacatgggc
acgttcacgagcgcccgccgccacgtgctcggcaccttcaccaactcgcagagcgccctc
atgcgccgacgggcggcaagctacctcgtgagcgaggattgcccggtctgccaaggcaag
cgcctgaagcccgaagcgctctcggtcaccttcgcggggctggatatcggcgagctgtcg
cggatgccgctcgccgacctggccgaagcgatgcggccggcggccgaggaccggctgccc
gacgaggctgacggcagcgcgccggacaccctcgaccgcgacacgggccttcgggatcgc
gcccggcgcgccgcgtccggagcctcggcccatgcgggcgcgccggacgtgcgcgcgacg
ccgaatctttccatcgagaagcggctggccgcccagcgcctcgcggccgacctcatcgac
cggattggaacgctgacggagctgggtctgggctacctgtcgctggaccgggtgaccacg
accctgtcctcgggcgagttgcagcggctgcgcctcgccacccagctccgctcgcagctc
ttcggcgtggcctacgtgctcgacgagcctacggccgggctgcaccccgccgacggcgat
gccatgcacgacgcgctggccgggctgctcgcctcgggcaattcgctattcgtcgtcgag
cacgacatcggtacgatgcgccgcgccgactggctcgtcgatgtgggtccggcggcgggc
gagcacggcggcaccgtgctctatagcgggccgccggaaggccttcgcgacgtggaggcg
tcgcgcacgcgtctccacctgttcggcatggccgagccgccgcagcgcccgcggcgggag
ccttcgggatggctgcgcctggagggcatcgtccgcaacaacctgcgcggggtctcggcc
gcgttcccgctgggttgtctcaccgccgtgacgggcatctccggctccggcaaatcgagc
ctcgtgagccaagccctgctggagctcgtcggcgaccgcctcggacggcccgtcgaaatc
gacgacgagccggaagatccgctcgacgacgcgccgggcccgacggaggggcgcatcgtc
ggcgggatggacgggatccggcgtctggtgaaggtcgatcagaagccgatcgggcgcacg
ccccgctcgaatctcgcgacctataccggtctgttcgacgccgtccgcaagctgttcgcc
gccacccccgaggcccgcaagcgccgctacgacgccggccgcttctccttcaacgtcgcg
aagggccgttgcccggcctgcgagggcgaaggcttcgtcagcgtcgaactcctgttcatg
ccgagcgtctacgccccctgcccgacctgccacggcacccgctacgcgcccgacacgctg
gaggtcacctggaacgggctgaccatcgcggacgtgctcgggctcactgtcgagcgcgcc
tgcgacgccttcgcggacgagccgtccgttttgcgacccctggccgtgctgcgagatctc
ggcctcggctacctgcgcctgggccagccggcgaccgaactctccggcggggaagcccag
cgcatcaagctcgccacggagcttcagaggggccagcgcgggggcacactctacgttctc
gacgagccgacgaccgggctgcacccgaccgacgtggaccgcctcatgctccagctcaac
ggcctggtcgatgcgggcaacgcggtcgtcatggtcgagcacgacatgcgcgtcgtcgcc
ggagccgatcacgtcatcgacgtggggcccggcgccggaaacctcggcggtaccgtcgtg
gcggccggccatcccgaggacgtggccgaggcgcgagggagccggacggcaccgtatctg
cgggacgaactcatggcctatgcgggccaggagtcttcaccacggcttgccggctga
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