Methylorubrum extorquens PA1: Mext_0304
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Entry
Mext_0304 CDS
T00640
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_0304
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mext_0304
Archaeal homologous recombinant proteins
Mext_0304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ABY28728
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Position
340156..341403
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AA seq
415 aa
AA seq
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MIRVLHTGDWHIGQTLRGFSREREHDAVFGCLESIVVEREVDALVVAGDVFDSQNPSGES
QARFYTLMARLHAARPAMTIVITAGNHDAAGRLEAPRPLLEAIGVHVVGNVRRRDGAIDL
DRHLVPVRSANGEVAAQVLAVSYPTAACLPPLSSLGQQPRIGETSPIVRAVRDLYGQLFE
AARPRLAGLPLLVTGHLHVAGGLESEGAERRILVGGEHAVPSDVFPEEARYVALGHLHRA
QVLGRGQVRYCGSLIPLSAAEQPYRHGVTLVTLGTGAAEIEHIEIPRPVPFLRLPASGDM
PLADLGDHLNALALDPDLPMEARPYIQVRLAREGLLPGYRAEVDRIAESFPVRVVDVRVT
VPPRTAIAIEESEAPPPRLSERDPEELFRLAYHAKWDEDPEPAHLDVFHRARAEA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcgttctccatacgggcgactggcatatcggccagacgctgcgcggcttctcg
cgcgaacgcgaacacgacgcggtgttcggttgtctcgagagcatcgtcgtggagcgcgag
gtcgatgccctcgtcgtggccggcgacgtgttcgacagccaaaacccgtccggcgagtcg
caggcccgcttctacaccttgatggcgcgcctccacgcggcgcggccggccatgaccatc
gtcatcaccgccggcaatcacgatgccgccgggcggctggaagcaccgcgcccgctgctc
gaagccatcggcgtccacgtcgtcggcaatgtccgccgccgcgatggcgcgatcgacctc
gaccggcacctcgttccggttcgctcggccaacggggaggtggccgcgcaggtgctcgcc
gtctcctatcccaccgccgcctgcctgccgccgctctcgtcgctgggtcagcagccccgc
atcggcgagacgtcgccgatcgtgcgggcggtgcgcgacctctacggccagctcttcgag
gcggcccggccgcggctcgccggcctgccgctcctcgtcaccggccatctccatgtggcc
ggcgggctcgaatcggagggggcggagcggcgcatcctcgtcggcggtgagcatgccgtg
ccgtccgacgtgtttccggaggaagcgcgctacgtggcgctgggccatctccaccgggcg
caggtgctgggccggggacaggtgcgctattgcggctcgctgatcccgctctcggcggcc
gagcagccctaccgccacggggtcaccctggtgacgctcggcaccggcgccgcggagatc
gagcatatcgagatcccccgccccgtgccgttcctgcgcctgccggcctcgggcgacatg
ccgctggccgatctcggcgaccatctcaacgccctggcgctcgaccccgatctaccgatg
gaggcgcggccctacatccaggtgcggctcgcccgcgagggattgctgcccggctaccgc
gccgaggtggaccgcattgccgagagctttccggtgcgcgtggtcgatgtgcgggtgacg
gtgccgccgcggaccgcgatcgcaatcgaggaatccgaagcgccgccgccgcgcctgtcc
gagcgcgatccggaagagctgttccgccttgcctaccacgccaagtgggacgaggacccc
gagcccgcccatctcgacgtgttccaccgcgcacgagcggaagcctga
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