KEGG   Methylorubrum extorquens PA1: Mext_0305
Entry
Mext_0305         CDS       T00640                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mex  Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:mex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mex03400]
    Mext_0305
DNA repair and recombination proteins [BR:mex03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mext_0305
    Archaeal homologous recombinant proteins
     Mext_0305
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_29 ABC_tran nSTAND_NTPase5 nSTAND3 AAA_22 AAA_21
Other DBs
NCBI-ProteinID: ABY28729
LinkDB
Position
341415..345161
AA seq 1248 aa
MRILAIRGENLASLAAPFAVDLAAEPLGATGLFAITGETGAGKSTILDALCLALYGRYPR
VAVSRREDVPDPGGEALSASDGRAILRRGAGSGYAEVDFIGQDGVAYRVGWEAFRARNRA
TGKLQAERRRLHRLDDGSAVAAGKTQVLDRVVALTDLTFDQFRRTVLLAQGEFDAFLLAA
EGERAELLEKITGTAIYSEISKRVHLGFEEHRRAVEALELRRGEIGLLDAEGLSSRNAES
EALRAGVEAWRGEQAAVGRILETARRIEAARTALAEAERRAVSAGESLDAAGPDRARLAE
LDAVEPLRGRAEALGETARERGEAQARVEATSARVRDAHAAAATAEAKRAEANAGDEAAE
AVFKSFGPLWDRAAALDATIAIAEQEAAAAAQAALRSNEAAAAADAALTAIDRRLDEARA
ARDAAARQLEADRSHAPLAERGDDVARRIRERARLQEQAEAAGKESAARRAEIAGCDGEA
EAGTARLTAFRARRETLAGARAEREAALAALAEPAAQARSAALEGLLDALREAYALAGRH
GTALADRAAATEAEAEAGLVATEAAARYGAEDQALHEAGIRRAEIAPLAELAEESVSREA
ARLRSLLVAGGPCPVCGSSDHPHAHESDGALGRLAEEMRARRAELDVRIGEHQAARDRAR
GDFAAAEGRRDDAQERAAAAAEAAAATAARYRATLPGLLASLEAAGLAAVLPPGPDAPAL
AAAGTTARAERDATLHVLATARTLRSEIDGLIRERDAAEARAEAEARALDALTRRRTEAG
LAAERSESTRAALMQRVAELADEIAPALSAADLSLADLDRAPEMCADRVSRLGQAYAALR
TRLAGLEAQLGALAPERAAAASSREAETRAAVKARAEAEERQTRLNQARAERAGLLGGLQ
TGTHRTRLNNERRAAREALQAAQTACAEAARALTGAVTDEAAAIAALERAAARHSSAEDA
FAQACGERGREAVAALLAVPIETRDALRAGLDRLAREAAETRTALATRRADVEALDTEAG
IDVAAAEAETTRLADAMAQAQQRLGALDAELRRDEAARAKAADLAGEIEAATAELTTWHR
VEEAIGSAGGDRFRRFAQGVTLDHLVHLANEQLRALSPRYRLARSVGADLALHVVDRDMG
DERRATRSLSGGERFLVSLALALALSGLEGRQSFVDTLFIDEGFGSLDAETLDLAVDALE
TLQGRGRKVGVITHVAGMMERIAVQIRVEKRGSGRSVVRVVDRGAAIV
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgcgcatcctcgcgatccgcggcgagaacctcgcgagcctcgccgcgcccttcgcggtc
gatctcgcggccgagccgctcggcgccaccggcctgttcgccatcaccggcgagaccggc
gccggcaagtccaccatcctcgacgcgctctgcctcgcgctctacggccgctatccccgc
gtcgccgtgagtcgccgggaggacgtgcccgatcccggcggcgaggcgctgagcgccagc
gacggtcgggcgatcctgcgccggggcgcgggttcagggtatgccgaggtcgatttcatc
ggccaggacggcgtcgcctaccgcgtcggctgggaggcttttcgcgcccgcaaccgggcg
accggaaagcttcaggcggagcggcggcgcctgcatcggctcgacgacggcagcgccgtc
gccgcgggcaagacgcaggtgctcgaccgggtggtcgcactgaccgacctgaccttcgac
cagttccgccgcacggtgctgctggcgcagggcgagttcgacgccttccttctcgctgcc
gagggcgagcgggccgagcttctggagaagatcaccggcacggcgatctattccgagatc
tcgaagcgggtgcatcttggcttcgaggagcaccgccgcgcggtcgaggcgctggagctc
cgccgcggcgagatcggtctgctcgatgcggagggtctctcgagccgcaacgctgagagc
gaggctttgcgcgccggggtcgaggcatggcgcggcgagcaggccgcggtcggccgcatc
ctggagacggcccgccggatcgaggccgcgcgcacggcgctcgcggaggccgaacggcgc
gccgtgtcggcgggtgaaagcctggacgcggccgggccggaccgggcccggcttgccgaa
ctcgacgcggtcgagccgctgcgcggacgggccgaggccttgggcgagaccgcccgcgag
cgcggcgaggcgcaggcgcgggttgaagcgaccagtgcccgtgtccgagacgcccacgcc
gccgccgcgacggccgaggcgaagcgggctgaggcgaatgcgggggacgaggcggcggaa
gccgtcttcaagagcttcgggccgctgtgggaccgagccgccgcgctcgacgcgaccatt
gccatcgccgagcaggaagccgcggctgccgcgcaggcggccctccgatcgaacgaagcg
gcggcagcggcggatgccgcactcaccgcgatcgatcgccgcctcgacgaagcgcgggcg
gcacgcgacgccgcggcccgccagctcgaggccgaccgcagccatgcgccgctggccgaa
cgcggcgacgatgtcgcccggcgcatccgtgagcgagcgcggctgcaggagcaagcggag
gcggccgggaaggaaagcgcggcgcggcgcgccgagatcgccggttgcgacggtgaggcg
gaagccggcacggcccgcctcaccgcgttccgcgcccgccgagagacgttggccggtgct
cgcgcggaacgcgaggccgcactcgctgcgctcgccgagcccgccgcgcaggcgcgcagc
gccgctctcgaagggctgctcgatgccctgcgcgaggcctacgccctggccggacgccac
ggcacggcactcgccgaccgggccgccgccacggaggccgaggcggaagcgggcctggtc
gcgaccgaagccgccgcgcgctacggggcggaagaccaagcgttgcacgaggccgggatc
cgccgcgccgagatcgcgcccctggccgaactggccgaggaaagcgtctcgcgcgaggcc
gcccgcctgcgcagcctgctcgtcgccggcgggccctgccctgtctgcggcagctccgac
catccgcacgcccacgaatccgacggcgcgctcggccgcctcgccgaggagatgcgggcc
cgtcgcgccgaactcgatgtgcggatcggcgagcatcaagccgcccgcgaccgcgcccgc
ggtgacttcgcggcggcggagggccggcgcgacgatgcccaagagcgcgccgccgccgcg
gccgaggcggcggcggccaccgctgcccgctatcgcgccacgctgcccggtctcctggcc
tcgctcgaagcagcaggcctcgcggccgtgctgccgccagggcccgatgcgccagcgctc
gccgcggccgggacgaccgcccgggccgaacgcgacgccacgctgcacgtgcttgccacg
gcgcggacgctgcgcagcgagatcgacggactgatccgcgaacgcgacgcggcggaggcg
cgggccgaagcggaggcccgcgcgctcgacgccctcacccggcgccggaccgaggcgggt
ctcgcggccgagcgctcggagagcacgcgggccgccctcatgcagcgcgtggcggagctg
gcagacgagatcgcgcccgccctgagcgctgccgacctgagcctggccgatctcgatcgg
gcgcccgagatgtgcgccgaccgtgtctcgaggctcgggcaggcttacgcggcattgcgc
acccggctggccggcctggaagcgcaactcggcgccctggcgcccgaacgggccgccgcc
gcatcctcgcgggaggccgagacgcgggccgccgtgaaggcccgcgcggaggccgaggaa
cggcagactcgcctgaaccaggcccgtgcggaacgcgccgggctcctcggcggcttacag
accggcacccaccgcacccggctcaacaacgagcgccgtgccgcccgcgaagccctccag
gccgcgcagaccgcctgcgctgaggccgcccgcgcgctgaccggtgccgtcaccgacgag
gccgctgccatcgcggccttggagcgtgccgccgcacgccacagctcggccgaggacgcc
ttcgcgcaggcctgcggtgagcgcgggcgcgaggcggtggccgcgctgctcgccgtgccg
atcgagacccgcgacgcgctgcgggccggcctcgaccgactggcgcgtgaggccgccgag
acgcgaaccgccctcgccacccgccgcgcggatgtcgaggccctggacaccgaggccggg
atcgacgtcgccgccgctgaggccgagacgacccggcttgccgacgccatggcgcaggcc
cagcaacgcctcggcgccctcgatgcggagttgcgccgggatgaggccgcccgcgccaag
gccgccgacctcgcaggggagatcgaggcggccacggccgagctgacgacgtggcacagg
gtcgaggaggccatcggctcggcgggcggcgaccgcttccgccgcttcgcgcaaggggtg
accctcgatcacctcgtgcatctcgccaacgaacagctccgggccctgagcccccgctac
cgcctcgcccgcagcgtcggcgccgacctcgccctgcatgtggtggaccgcgacatgggc
gacgagcgacgggcgacccgtagcctgtcgggcggtgaacgcttcctcgtctcgctggcg
ctggcgctggccctgtcgggcctggaagggcggcaatccttcgtcgacaccctgttcatc
gacgagggcttcggctcgctcgacgccgagaccctcgatctggccgtcgatgccctcgaa
acgctccagggccgcggccgtaaggtcggcgtcatcacgcacgtcgcgggaatgatggaa
cgcatcgccgtgcagatccgggtggagaagcgcggcagcggccgcagcgtggtccgggtc
gtggatcgcggcgctgccatcgtttga

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