Methylorubrum extorquens PA1: Mext_0325
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Entry
Mext_0325 CDS
T00640
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03030
DNA replication
mex03430
Mismatch repair
mex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mext_0325
03430 Mismatch repair
Mext_0325
03440 Homologous recombination
Mext_0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mex03032
]
Mext_0325
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_0325
Enzymes [BR:
mex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mext_0325
DNA replication proteins [BR:
mex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mext_0325
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mext_0325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABY28749
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All DBs
Position
complement(367638..368531)
Genome browser
AA seq
297 aa
AA seq
DB search
MKVVAIDFETANERRDSACAVGLAWIEGGRVVRRESRLIRPPQLRFSPGNIRVHGILPAD
VRDAPTFPEVIAEFLPDLSGGLMLAHNAGFDMGVLAASLAAWGEPVPDMAGHCTLQIARR
VFPDPAGHGLAKVAGRLGIRFEHHDAGEDAFACAEIALAALHETGAADIADLARGLGLTP
IRALTTPRRDMTRSTSAKALRASGIVDLRPTNALRFAMRGSTGNRYSLEFEERTDGPYLR
CSCPAGTHRRRCRHVDALVEGDITELTSNNFDDVERLRQLLDGKSVGPLRIKGVAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgcgatcgatttcgagaccgccaacgagcggcgcgacagcgcctgcgcg
gtcgggcttgcctggatcgaagggggccgcgtggtgcggcgcgaatcccggctgatccgc
ccgccgcagttgcggttctcgcccggcaatatccgcgttcacggcatcctgccggcggac
gtgcgcgacgcgccgacctttcccgaggtcatcgccgagttcctgcccgacctctcgggc
gggttgatgctcgcgcataatgccggcttcgacatgggcgtgctcgccgcctcgctcgct
gcctggggcgagccggtgccggacatggccggtcattgcaccctccagatcgctcgccgc
gtcttccccgatcccgcgggccacggcctcgccaaggtggcgggccgcctcggcatccgc
ttcgagcaccacgatgccggcgaggatgcctttgcctgcgccgagatcgcgctcgcggcc
ctgcacgagacgggtgcggccgacatcgccgacctcgcccgcgggctcggcctcactccg
atccgtgctctcaccacgccgcgccgggacatgacccgctcgacctcggcgaaggcgctg
cgcgcctcgggcattgtcgatctgcggcccacgaacgccctgcgcttcgccatgcgcggc
agcaccggcaaccgctactcgctcgaattcgaggagcggacggacgggccgtatctgcgc
tgctcctgcccggcgggcacccaccgtcgccgctgccgccatgtcgatgcgctggtcgag
ggcgatatcaccgagctgacgtcgaacaatttcgacgatgtcgaacggctgcgccaattg
ctcgacggcaagagcgtcggaccgctgcggatcaagggcgtcgccgctgcctga
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