Methylorubrum extorquens PA1: Mext_0993
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Entry
Mext_0993 CDS
T00640
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex00330
Arginine and proline metabolism
mex00480
Glutathione metabolism
mex01100
Metabolic pathways
mex01110
Biosynthesis of secondary metabolites
mex04148
Efferocytosis
Module
mex_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Mext_0993
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Mext_0993
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Mext_0993
Enzymes [BR:
mex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Mext_0993
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DUF7588
Motif
Other DBs
NCBI-ProteinID:
ABY29398
LinkDB
All DBs
Position
complement(1069579..1071924)
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AA seq
781 aa
AA seq
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MDFHRRFTVLMCTPAFDPDDLEGARVDQIVAAVEKRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRKRGLEMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARGLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEGRIRE
KIRDNPLVKDKEAWRKERPFRCAVIEQCTYDGTIYDAQAIVERIGHLCDYILFDEAWAGF
MKFHPLYQRRFAMGLTGLDEISPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVKGPEGTEIPWESVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYAEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYRGVRLRDLCADYHAFHR
ESGTSALQRKQFMPEHLPEMVMAPKAAAQMLTRNRVDYVPIAEAEGRVATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEAAANLFPGFEAEIQGVYRESDPDGRIRFHTYVLREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaccgccgcttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggagggcgcgcgcgtcgatcagatcgtcgcggcggtggagaagcgcggcttcgaggtg
gtgcgggcgcggcgcgtcgaggatgcctcgatcgcggtgcagaccgactccgccgtcggc
tgcctcgtggtggattggggcaagcgcggactcgagggcaaggcggctgcgctcatcgac
atgatgcgcaagcgcggcctggagatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctgctcgacttcatcgacggctacatcttcctcgccgaggag
acgcccgaattcattgcccgcggcctcgtttcccgcgtgacgcagtatgccgacacgctg
aagacgccgttcttcggcgcgctcgtcgattacgccgaagagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgccgatcggccgcatcttcgtc
gagcatctcggcgaggcgatcttccgcgacgacctcgacaactcggtgctcgatctcggc
gacctgctgacccacgaggggcccgcgctcaaggcgcagaaggaagcggcaaagatcttc
ggggcggaaaagacctatttcgtcctcaacggcacctcggcctcgaacaaggtcgtgctg
ggctcgctggtggccgaggacgatctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgctggccggcggcatcccgattttcctcgagaccgaccgcaac
gcctacgggttgatcgggccgatctaccacgaggcgctcgacgaggggcgcatccgcgag
aagatccgcgacaacccgctcgtgaaggacaaggaggcgtggcgcaaggagcgcccgttt
cgctgcgccgtgatcgaacaatgcacctatgacggcacgatctacgacgcgcaggcgatc
gtcgagcgcatcggccacctgtgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctaccagcgccgcttcgccatgggcctgaccgggctcgacgag
atttcgccgggcatcatcgccacgcaatcgacccacaagcagctcgccagcttctcccag
gcctcgcagatccacacccgcgacgggcatatccgcggccagacccggcgggtcgagcac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacgatccgcctcggcatcgagtggcgcaagaaggcccgcgccatccgcaaggagttc
gaggagcgcgaggccgacccgaagcggcgctggttcttcgaccccttcgtgcccgacgtg
gtgaaggggcccgagggcacggaaatcccgtgggaatccgtgccgaccgacgccctggcc
gccgacgcccgctactgggagctgacgccgggcgcggcgtggcacggcttcacccatgtc
gcgccgggttttgccatcaccgaccccaacaagctcaccgtgctcacccccggcttcgac
cggaagacgggggcctatgccgagcacggcgtgccggcgccgatcgtcgcgcaatacctg
cgcgagaaccggatcgtcccggagaagaacgacctcaactcgctgctcttcctgctgacg
ccgggcgtcgagtcgtcgaaggcgggcacgctcatctccggcctcgtcgccttcaagcgg
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtggcacgccggccc
aagcgctaccgcggcgtgcgcctgcgcgacctctgcgccgattaccacgccttccaccgc
gagtcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgccggagatg
gtgatggcgcccaaggccgccgcgcagatgctgacccgcaaccgggtcgattacgtgccg
atcgcggaggccgaggggcgcgtcgccacgaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgcccggcgagcgcctcgacgagcgggccaagcccatgctcgactatttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
tatcgcgagagcgatccggacgggcgcatccgcttccacacctacgtcctgcgcgagggc
gcctga
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