Methylorubrum extorquens PA1: Mext_1010
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Entry
Mext_1010 CDS
T00640
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mext_1010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_1010
Enzymes [BR:
mex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mext_1010
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mext_1010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_19
zf-CHY
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ABY29415
LinkDB
All DBs
Position
1096315..1098492
Genome browser
AA seq
725 aa
AA seq
DB search
MPAVAEILIPLALDTAYSYAVPAGLTLAEGDIVQVPLGPRETIGVVWGLDERASGGNLRP
VTGKVEAPPLSESLRKLVDWLARYTLAPKGSALAMALRLPDEAARNEAPRVGVRAAGKPP
TRQTVARGKVMAVAADNAVRGKSALAKEAGVSLSVVDGLIDDGALETVALMPEPVALPPD
PDHPRVPLSDAQAEAAHALIADAPSPADTATGETILLEGVTGSGKTEVYFEAVAECVRQG
RQALVLMPEIALTAQFLDRFAGRFGVRPATWHSGIGGKRRERLRAGVAAGEVSVVVGARS
ALFLPFRNLGLIVVDEEHESAYKQEDGVHYHARDMAVVRGKIEGCPVVLASATPSIESRV
NAQSGRYRHVVLPGRFGGRPMPDIAAIDMRLDKPERGRFLSPPMVNAVKSTLAAGDQALL
FLNRRGYAPLTLCRACGHRYQCRNCSTWLVEHRFRRALVCHQCGYAERKPEACTECGAFD
HLTPCGPGVERIAEEVTELFPEQRIVVLSSDFPGGAERLRQELETVAAGDCDIVVGTQLV
AKGHNFPHLTLVGVLDADIGLTSGDPRAAERTFQLLQQVTGRAGRGERPGRALVQTYQPE
HPVIAALLSGDADRFYEEEIWAREAAGLPPFGRLAALIVSGEEREKAEAHGQALARVAEP
PPGVSVLGPAEAPLALIRGRWRFRLLVKTERGIDVQSYLRDWLARGPKPRGNLKVAIDVD
PQSFL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtcgccgaaatcctgatcccgctcgcgctcgacaccgcctacagctacgcg
gtgccggccgggctgaccctcgccgagggcgacatcgtgcaggtgccgttgggtccgcgc
gagacgatcggcgtggtctgggggctcgacgagcgggcctcggggggaaacctgcggccg
gtgacgggcaaggtcgaggcgccgccgctctcggagtctctgcgcaagctggtcgattgg
ctcgcgcgctacaccctggcgccgaagggttcggcgctcgccatggccctgcgcctgccc
gacgaggccgcccgcaacgaggcgccgcgggtcggcgtgcgcgccgccggcaagccgccg
acccggcagacggtcgcccgcggcaaggtgatggcggtcgccgccgacaacgcggtgcgg
ggcaagagcgcgctcgccaaggaggccggggtctcgctcagcgtggtcgatggactgatc
gatgacggcgcgctggagaccgtggcgctgatgcccgagcccgtggcgctgccgccggac
ccggaccatccgcgggttccgctgtccgacgcacaggcggaggcggcgcacgccctcatc
gccgacgccccttcccccgccgatactgcgaccggtgagacgatcctcctcgaaggcgtc
accggctcgggcaagactgaagtctatttcgaggcggtggcggagtgcgtgcggcagggg
cggcaggccctggtgctgatgccggaaatcgcgctgaccgcgcagttcctcgaccgcttc
gccgggcgcttcggggtgcggccggcgacctggcattccggcatcggcggcaagcgccgc
gagcggctgcgggcaggggtggccgcgggcgaggtctcggtggtggtcggcgcccgctcg
gccctgttcctgccgttccggaatctcggcctgatcgtcgtcgatgaggagcacgaatcc
gcctacaagcaggaggacggcgtccattatcacgcgcgcgacatggcggtggtgcgcggc
aagatcgagggctgcccggtggtgctcgcctcggccacgccctcgatcgagtcgcgggtc
aacgcccagagtgggcgctaccgccacgtcgtgctccccggccgcttcggcgggcggccg
atgcccgatatcgccgccatcgacatgcgcctcgacaagccggagcgcgggcgcttcctg
tcgccgccgatggtgaacgcggtcaaaagcacgctggccgcgggcgatcaggcgctgctg
ttcctcaaccgccggggctacgcgccgctcaccctgtgccgggcctgcggccaccgctac
cagtgccgcaactgctcgacctggctcgtggagcaccgcttccgccgcgcgctggtctgc
caccaatgcggctacgccgagcgcaaaccggaggcctgcaccgagtgcggcgccttcgat
cacctcacgccctgcgggccgggcgtcgagcggatcgccgaggaggtgaccgagctgttc
cccgagcagcgcatcgtcgtgctgtcgagcgactttcccggcggcgccgagcggctgcgc
caggaactggagacagtggcggcgggcgattgcgacatcgtcgtcggcacgcagctcgtg
gccaagggccacaacttcccgcacttgactctggttggggtgctcgacgccgatatcggt
ctcacctccggcgatccgcgcgcggccgagcgcaccttccagctcctgcagcaggtgacg
gggcgtgcggggcgcggcgagcggccgggtcgggccctggtgcagacctaccagcccgag
catccggtcatcgccgccctgctctcgggggatgccgaccgcttctacgaggaagagatc
tgggcccgcgaggccgcggggcttccgccgttcggacggctcgcggcgctgatcgtctcc
ggggaagagcgggagaaggccgaggcgcacggtcaggcgcttgcacgcgtcgccgagccg
ccgcccggcgtctccgtcctcggcccggcggaggcgccgcttgccctgatccgcgggcgc
tggcgattccggctgctggtgaagaccgagcgcggcatcgacgtgcagagttatctgcgg
gattggctggcgcgcggaccgaagccgcggggtaacctcaaggtcgcaatcgacgtggac
ccgcagagcttcctataa
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