Methylorubrum extorquens PA1: Mext_1178
Help
Entry
Mext_1178 CDS
T00640
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex00450
Selenocompound metabolism
mex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Mext_1178
Enzymes [BR:
mex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Mext_1178
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Mext_1178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABY29580
LinkDB
All DBs
Position
1296926..1298944
Genome browser
AA seq
672 aa
AA seq
DB search
MTTPNAPALGLPTGNAGDLAHADLVGRLAREITGQGQAGSAPFQPQLPQTPQVPQGLETL
PTGSGQPALPGANLGTPSVPSGALPSGFQPDLSAQAARSFGAPPAGLPGLTGPSHANPVG
ATPAPASANLFDVAAIPSVHPFTNPNRLPEFFVPSLPDVAAAIPGGPDLHRQIAADHPRA
NGFAHALAPHLVPRDPGKPGGDAAQEHFSEFGHLPHPRTPDNTGDYYFLSPAPPPARGKK
AAAQPRVEPSRHAGPAPRVTSHGSVPAGAPFDVEHVRKDFPALHQSVNGHRLVWLDNAAT
THKPQSVIDATSEFYGRHNSNIHRAAHTLAARSTDLFEGGREKTRRFLNAPSKDDIVFLR
GTTEAINLVANSYGRANIGPGDEIIVSTIEHHANIVPWQLLAQATGATIRVIPVNDRGEI
IFEQYAALLSGRTKIVSVTHVANALGTVNPIREIIALAHAYGVPVLVDAAQSTPHIPIDV
QALDADFLVFSGHKVFGPTGIGALYGKRHLLEAMPPWQGGGHMIEDVTFAKTVYKGAPEK
FEAGTPDIAGAVGLGAALDYLESVGLPAIAAYEHDLLEYAQEGLADVKGLRLIGTALNKA
SVMSFTVDGLTNEAVAHHLDSLGIAVRSGHHCALPALRRFGVDQSVRASLAFYNTREDVD
LFLRGLHTLPRH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcctaacgcccccgctctcggtcttccgaccggcaacgcgggcgatctggcg
catgccgatctcgtcgggcgcctcgcccgcgagatcaccggccagggacaggcgggtagc
gcaccgttccagccccaactgccgcagacgcctcaagtcccccaggggcttgagaccctt
cccaccggttccgggcagcccgcgctgcccggcgccaatctgggtacgccctccgtgccc
tcgggcgcgctgccgtcgggattccagcccgacctgtcggcgcaggccgcgcgctccttc
ggcgcgccgccggccggcctgccgggcctgaccggtccgtcccatgccaacccggtcggc
gcgacgcccgcgccggcgagcgcaaacctgttcgacgtggcggcgatcccctcggtgcat
ccgttcacgaacccgaaccggctgcccgaattcttcgtgccgagcctgcccgacgtcgcc
gcagcgatccccggtggccccgacctgcaccggcagatcgcggccgaccatccccgcgcc
aacggcttcgcccacgcgctggcaccccacctcgtgccgcgcgatcccggcaagcccggc
ggcgacgccgcgcaggagcatttttcggagttcggccacctgccgcatccgcgcacgccg
gacaacacgggcgattactacttcttgagcccggccccaccgcctgcgaggggcaagaag
gctgcggcccagccgcgggtcgagccctcgcgccacgcggggcccgccccgcgggtgacc
tcgcacgggtcggttccggccggcgcgccgttcgatgtcgagcacgttcgcaaggatttt
ccggcgctgcaccagagcgtgaacgggcaccgcctcgtctggctcgacaacgcggccacc
acccacaagccgcagagcgtgatcgacgccacgagcgaattctacggtcgccacaactcg
aacatccaccgggccgcgcacacgctcgccgcgcgctccaccgacctgttcgagggcggt
cgcgagaagacgcgccgcttcctcaacgcgccgagcaaggacgacatcgtcttcctgcgc
ggcaccacggaagcgatcaacctcgtcgccaactcctacggccgggccaatatcggcccc
ggcgacgagatcatcgtctcgaccatcgagcaccacgccaacatcgtgccctggcaactt
ctggcacaggcgaccggcgcgacgatccgggtgatcccggtcaacgatcgcggcgagatc
atcttcgagcaatacgcggctttgctctcgggccgcaccaagatcgtctcggtgacgcat
gtcgccaacgcgctgggcaccgtgaacccgatccgggagatcatcgctctggcgcatgcc
tacggcgtgccggtgctggtcgatgccgcgcaatcgacgccgcacatccccatcgacgtg
caggcgctcgacgccgatttcctcgtcttctccggccacaaagtgttcgggccgaccggc
atcggcgccctgtatgggaagcggcacctcttggaggcgatgccgccgtggcagggcggc
ggccacatgatcgaggacgtcaccttcgctaagaccgtctacaagggcgcacccgaaaag
ttcgaggcgggcacgcccgacatcgccggcgcggtgggtctcggtgcggcgctcgattac
ctggagagcgtcggcctgccggcaatcgcggcctacgagcacgacctgctcgaatatgcg
caggaaggcttggctgacgtgaagggcctgcgcctgatcggcaccgcgctcaacaaggcg
agcgtcatgtccttcacggtcgatggcctcaccaacgaggccgtcgcccaccacctcgat
tccctcgggatcgcggtgcgctcgggccaccactgcgccctgccggcgctgcgccgcttc
ggcgtcgatcagtcggtgcgcgcctcgctggccttctacaacacgcgggaggacgtcgac
ctcttcctgcgcgggctgcacaccttaccgcggcactga
DBGET
integrated database retrieval system
