KEGG   Methylorubrum extorquens PA1: Mext_1258
Entry
Mext_1258         CDS       T00640                                 
Name
(GenBank) sigma-54 factor interaction domain-containing protein
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
mex  Methylorubrum extorquens PA1
Pathway
mex02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Mext_1258
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mex02022]
    Mext_1258
Two-component system [BR:mex02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Mext_1258
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_2 AAA HTH_30 AAA_16 HTH_20 BrxC_BrxD HTH_1 bpMoxR FleQ OKR_DC_1_N HTH_23 HTH_28
Other DBs
NCBI-ProteinID: ABY29660
LinkDB
Position
complement(1393039..1394394)
AA seq 451 aa
MFPEAEPAAARVVLIDDEEMVRLAMEQALQLAGIAVEAFSSAEAALPAIGRGFSGIVVSD
VRLPGRDGLELLADIRRRDPELPVVLVTGHGDIAMAVAAMREGAYHFIEKPFVNDAFVEV
VRRALEKRALVMENRRLRDALDRGDAPGSAVERCLVGQSPALRRLRDDIASLSSAAADVL
VLGETGAGKEQVARALHEGGARAAKPFVAINCGAIPESMFESEMFGHEAGAFTGAGKRRI
GKVEHASGGTLFLDEVESMPLALQVKLLRVLQERRVERLGSNTSVPVDLRVVAATKEDLD
ALSEAGRFRRDLFFRLNVVTLTLPPLRERREDIPLLFERFLVQAAVKYQRPVIEVPPSLR
RSLMLADWPGNVRELKNAAERYVLGFLSPDLAGGPGAAPSLDALLDRVERLVIEDALKAS
GQRIAEAARTLGLPRKTLSDRMRRLGLSAGD
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtttcctgaggccgagccagccgccgcgcgggtcgtgctgatcgacgacgaggagatg
gttcggctcgccatggagcaggcgctgcagcttgccggcattgcggtcgaggctttttcc
agcgccgaggcggcgctgccggctatcgggcgcggcttttccggcatcgtcgtgagcgac
gtacgtcttccgggccgcgacgggctcgaactcctcgccgacatccgccgccgcgacccc
gaattgccggtggtgctcgtcaccggccacggcgacattgccatggcggtcgccgccatg
cgcgagggcgcctaccacttcatcgagaagccgttcgtcaacgatgccttcgtcgaggtg
gtccgccgcgccttggagaagcgggcgctggtgatggagaatcgccgcctgcgcgatgcc
ctcgatcgcggcgacgcgccgggcagcgcggtggagcgctgcctcgtcggccagtcgccg
gccttgcggcggctgcgcgacgacatcgcctcgctcagttcggccgccgccgacgtgctg
gtgctcggcgagaccggggcgggcaaggagcaggtcgcccgtgccctgcacgagggcggc
gcgcgcgcggcgaaacccttcgtggcgatcaattgcggcgccatccccgagagcatgttc
gagagcgagatgttcggccacgaggccggcgccttcaccggggcgggcaagcgccgcatc
ggcaaggtcgagcacgcgagcggcggcacgctgttcctcgacgaggtcgagagcatgccg
ttggcgctccaagtgaaattgctgcgcgtgttgcaggagcggcgcgtggaacggctcggc
tccaacaccagcgtgccggtggatctccgggtggtggcggccacgaaggaggatctcgat
gcactctcggaagcgggccgcttccgccgcgacctgttcttccgcctcaacgtggtgacg
ctgaccctgccccccttgcgcgagcgtcgcgaggacatcccgctgctgttcgagcgcttt
ctcgtccaggcggcggtgaagtaccagcgcccggtgatcgaggtgccgccgtcgttgcgc
cgctcgctgatgctcgccgattggccgggcaacgtgcgcgaactcaagaacgccgccgag
cgctacgtcctcggcttcctcagcccggacctcgccggcggccccggcgcggcgccgagc
ctcgacgccctgctcgaccgggtggagcgcctcgtgatcgaggatgcgctcaaggcttcc
ggccagcggatcgccgaggcggcgcggacgctcggcctgccgcgcaagacgctctccgac
cgcatgcggcgtctcggcttgagcgcgggcgattga

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