Methylorubrum extorquens PA1: Mext_1473
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Entry
Mext_1473 CDS
T00640
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mext_1473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_1473
Enzymes [BR:
mex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mext_1473
DNA repair and recombination proteins [BR:
mex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mext_1473
Prokaryotic type
Mext_1473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF8307
Motif
Other DBs
NCBI-ProteinID:
ABY29874
LinkDB
All DBs
Position
1650483..1651187
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AA seq
234 aa
AA seq
DB search
MTGPVEAALAAFRASGSPWLDLPFFREGAADRVAKKVDARVAAGATVLPEPAAIFRALTL
TPLPAVKAVILGQDPYPTPGDANGLAFSYVGPRRLPASLKVILAELAPEGEKPDLSTGDL
TPWAERGVLLLNAALTTEAGKSGAHLRFGWSQLTDEAVAAVSARDAPAVFLLWGAQARAR
EALIDTSRHGVIASGHPSPLNRARDFPGSRPFDRANAWLEAEGRAPIDWRLGEG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacccgtcgaggccgcactcgccgccttccgtgccagcggctccccctggctc
gacctgcccttcttccgggagggcgcagcggatcgggtcgcgaaaaaggtcgatgcgcgc
gtcgcggccggggcgacagtgctgccggagcccgccgcgatcttccgggcgctgacgctg
acgcctctgcccgcggtgaaggcggtgatcctcggccaggacccctaccccacgccgggc
gacgccaacgggcttgccttctcctatgtcggcccgcgccgcctgccggcctcgctcaag
gtgatcctggccgaactcgctcccgagggggaaaagcccgacctctcgaccggcgacctc
acgccctgggcggagcgcggggtcctgcttctgaacgcggcgctcacgacggaggccggc
aagtccggcgcgcatctgcggttcggctggtcgcagctcaccgacgaggcggtggccgcc
gtctccgcccgcgacgcgccggcggtgttcctgctctggggcgcccaggcccgcgcccgc
gaggcgctgatcgacaccagccgccacggcgtcatcgcctcgggccacccctccccgctc
aaccgcgcccgcgactttcccggctcgcggccgttcgaccgggcgaatgcgtggctcgaa
gcagagggccgcgcgccgatcgactggcggttgggcgagggctga
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