Methylorubrum extorquens PA1: Mext_1580
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Entry
Mext_1580 CDS
T00640
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mex03016
]
Mext_1580
Transfer RNA biogenesis [BR:
mex03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Mext_1580
Prokaryotic type
Methyltransferases
Mext_1580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_29
RsgA_GTPase
ABC_tran
AAA_28
HflX_C
Motif
Other DBs
NCBI-ProteinID:
ABY29979
LinkDB
All DBs
Position
1762370..1763704
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AA seq
444 aa
AA seq
DB search
MSPPLPDRDDTIFAPASGFGRAAVTVVRISGPAAGLTLDRLAGGRPEPRRLSLRCLRDPE
SRDILDQALVAWLPGPATATGEDMAELHLHGGLAVRSAVLRALGRVPGCRPAEAGAFSRR
AFLNGRIDLTEAEGIADLIDAETEAQRVQALRQIDGALGRQVAAWRETGIDLLAGAEAAL
DFADEGDVDEAGLDAALSGRAAFLRDAIRAALADGRRGERLREGFCVVLAGAPNAGKSTL
LNALTGRDAAIVSDIPGTTRDAIEVRCDLGGLPVVLVDTAGLRDTADAIEAEGVKRTQSR
IRGADLVLHLVPADGETDAGRFADVPLLLVRTKTDLAPEVPGEGGLAISAVTGAGLDALL
DAIQAAAQTALGQGDALVTRERHREALSRAAAHLDRVATASAGFPPELVAEDLRLAVRAL
GEVGGHVGVEEMLDRLFAGFCIGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccccaccccttcccgaccgcgacgacacgatcttcgctccggcgagcggcttcggc
cgtgcggcggtgacggtggtgcgcatcagcgggccggcggcggggcttacgctcgaccgg
ctggccggcgggcgcccggagccgcgccgtctctccctgcgctgcctgcgcgaccccgaa
tcccgcgacatcctcgatcaggccctggtcgcatggctgccgggccctgccacggccacc
ggcgaggacatggccgagctgcatctgcatgggggcctcgccgtgcggtccgccgtgctg
cgggcgctcgggcgcgtaccgggttgccggccggcggaagccggggcgttcagccgccgc
gccttcctcaacggccgcatcgacctgaccgaggcggagggcatcgccgacctcatcgac
gccgagaccgaagcgcagcgtgtccaggccctgcgtcagatcgacggcgccctcggccgc
caagtcgcggcatggcgcgagaccggcatcgatctgctcgccggagcggaagcggccctc
gattttgccgatgaaggcgatgtcgatgaggccggcctcgacgctgccctgtccggccgc
gccgcattcttgcgtgatgcgatccgagccgcgctggccgacggacgccggggcgagcgc
ctgcgcgaggggttctgcgtcgtgctggcgggtgctcccaatgccggaaaatcgaccctg
ctcaatgcgctgaccgggcgcgacgcggccatcgtctccgacattcccggcacgacccgc
gatgccatcgaggtgcgctgcgatctcggcgggctaccggtcgtgctggtcgataccgca
ggcctgcgcgatacggcggatgcgatcgaggcggagggcgtcaagcgcacgcaaagccgg
atccgcggcgccgacctcgtgctccatctcgtgccggcggacggcgagaccgacgcgggg
cgctttgcggacgtccccctccttctcgttcgcacgaaaaccgacctcgcgccggaggtg
ccgggggagggcggcctcgccatctcggccgtcacgggggccggactcgacgcgctgttg
gatgccatccaggccgcggcccaaacggccctcggtcagggcgatgccctcgtcacccgt
gagcgtcatcgcgaggctttgtcccgggctgcggcgcatctcgaccgtgtcgccaccgca
tcggccggtttcccgcccgaactggtggcggaggacctccggctcgccgtccgggcgctg
ggcgaggtcggggggcatgtcggcgtcgaggagatgctggaccgtctcttcgccggcttc
tgcatcggcaaataa
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