Methylorubrum extorquens PA1: Mext_1974
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Entry
Mext_1974 CDS
T00640
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mex03032
]
Mext_1974
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_1974
Enzymes [BR:
mex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mext_1974
DNA replication proteins [BR:
mex03032
]
Prokaryotic type
DNA Topoisomerases
Mext_1974
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mext_1974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABY30373
LinkDB
All DBs
Position
2206017..2207219
Genome browser
AA seq
400 aa
AA seq
DB search
MLSEEVGAGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAPVRDAEEIARL
KSLAIPPAYTEVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMAFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKV
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDEEGERRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVSSRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKNELDVLRPEEAAVLSLLRARLERATK
AASKGTTSESTTKIEPPRQTGGRKARATGTKRTSGGRRAA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggtcggagccggcgtggtcgatccccgcgaggccgcgcgggatgca
ggcctgcgctacgtggacgattccaagcccggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgacccgaaaggcgccccggtccgcgacgcggaggagatcgcccggctc
aaaagcctcgcgatcccgccggcctacaccgaggtgtggatctgcccgcacccgaacggc
catatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgggaggcctcgaagttccaccgcatcatggccttcgctgaggcgctg
ccgggcatccgcgcgcggatcgacgccgatatgggcaagcgcggcctgccgcgcgagaaa
gtgctggccaccgtggtccacctcctggagaccacgctgatccgcgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcatgtgaaggtg
gccggctccgagatgcgcttccgcttcaagggcaagagcggcaaggaatggtcggtctcg
gtgcgcgaccgccgcgtggccaagatcgtcaaggcctgccaggacctgcccggccaggag
ctgttccagtatctcgacgaggagggcgagcggcgcgacgtcacttcctcggacgtgaac
gcctacctgcgcgagatcacgggcgaggatttcaccgccaaggatttccgcacctgggcc
ggcacggtgctggcggccctggcgctgcgggagttcgaggcgttcgacaacgcggccaag
gccaagaagaacctgcgcgcggcgatcgagtcggtgtcgtcccggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcggg
atgctgctgcaggtgaaggaggcggtcgagggcgaactcaagaacgaactcgatgtgctg
cgcccggaggaggcggcggtgctgagcctgcttcgggcccgtctggaacgggcgacgaag
gctgcctccaagggtacgacgagcgagagcacgacgaagatcgagccgccgcgtcagacc
gggggccgtaaggccagggcgaccggcacgaagcgcacgtctgggggcagacgggcggcg
tga
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