Methylorubrum extorquens PA1: Mext_2471
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Entry
Mext_2471 CDS
T00640
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03030
DNA replication
mex03410
Base excision repair
mex03420
Nucleotide excision repair
mex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mext_2471
03410 Base excision repair
Mext_2471
03420 Nucleotide excision repair
Mext_2471
03440 Homologous recombination
Mext_2471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mex03032
]
Mext_2471
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_2471
Enzymes [BR:
mex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mext_2471
DNA replication proteins [BR:
mex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mext_2471
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mext_2471
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mext_2471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH_2
EME1-MUS81_C
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ABY30866
LinkDB
All DBs
Position
2771870..2775013
Genome browser
AA seq
1047 aa
AA seq
DB search
MTEETQPQPAKPVCADDRVILVDGSSFIFRAYFQSINQDQKYNTRPSDGLPTGAVRLFCT
KIAQFLQEGAAGVKPTHLGIVFDKSEGSFRKELFPDYKGHRPDAPDDLKRQMPLMRDAVR
AFGLHAVELVRYEADDLIATYARQAEARGAEVIIVSSDKDLMQLVSDKIRFYDFESGAKG
KPGYRPERNLDREAIIAKWEGLAPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEYG
SLEQLLERASEIKQPKRREMLLANIDQAKLSRRLVALEESVPVPVPLDELGVPQPDPQKL
VGFLKAMEFNTLTRRIAQMLHVDPEAVKPDPALLPGAQPHAYSNAAGGSDAVPFFGDAVP
VDPETAAAPERTDGEAPPEAGEADPFADLDLPDQAPKKKRGSNEPTPATLVAARAAESVK
PFDTAAYETIATVAQLEAWIAESYEAGVIAVDTETDALDAAKAGLVGVSLATAPGRAAYI
PLAHVKPEVKGGDLFGESGAGADASDRQPGQIDFDTALKLLKPLLEDAGTLKVGQNLKYD
LSVLHRYGIDVRPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFADVAGTGRNKVT
FDRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVTVYETLERPLVPVLARMERAGIA
IDRNMLSRLSGDFSQILARLEEEIQEDAGERFQVSSPKQIGDVLFGKMGLPGAKKTPSGQ
WATPATLLEELAQAGHDLPKKILNYRQLSKLKSTYTDSLQQHADRGTNRVHTSFALAATT
TGRLSSSDPNLQNIPIRTEEGRRIRRAFVAPEGKKLISADYSQIELRLLAHIADIPQLRE
AFEQGIDIHAATASAMFGVALDQMTGDLRRRAKTINFGIIYGISAFGLADRLGIGREEAS
AFIKQYFERFPGIRDYIDTTKRSCREKGYVTTLFGRVCHYPQIRSNNPSERASVERQAIN
APIQGTAADIIRRAMTRMEDALEAKKLTARMLLQVHDELVFEVPDDEVEATIPVIAGVME
EAPAPALTLRVPLVVEARAAGNWEEAH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagacgcaaccgcaaccggccaagcccgtctgcgccgatgaccgggtgatc
ctcgttgacggctcgtccttcatcttccgagcgtacttccagtcgatcaatcaggaccag
aagtacaacacgcggccctccgacggcctgccgaccggtgcggtgcgcctgttctgcacc
aagatcgcgcagttccttcaggagggtgcggcgggtgtgaagccgacccatcttggtatc
gtcttcgacaaatccgagggctcgttccgcaaggagctgttccccgactacaagggccac
cgccctgacgcgccggacgacctcaagcgccagatgccgctgatgcgcgatgcggtgcga
gccttcgggctgcatgcggtcgagctggtgcggtatgaggccgacgacctgatcgcgacc
tacgcgcgccaagcggaggcgcgcggcgccgaggtcatcatcgtgtcctccgacaaggac
ctgatgcagctcgtctcggacaagatccggttctacgatttcgagtcaggcgccaagggc
aagcccggctaccgccccgagcgcaacctcgaccgcgaagcgatcatcgccaagtgggag
ggcctcgcgcccgagcagatcggcgacgccctggcactgatcggcgacacctccgacaac
gtgccgggtgtgcccggcatcggcctgaagacggcggctgcgctcatcaaggaatacggc
agcctggagcagctcttggagcgggccagcgagatcaagcagcccaagcgccgggagatg
ctgctcgccaacatcgatcaggccaagctctcgcgccgcctcgtcgcgctcgaggagagc
gtgccggtgccggtgccactcgacgaactcggcgtgccgcagcccgatccgcagaagctc
gtcggcttcctgaaggccatggagttcaacactctgacgcggcgcatcgcgcagatgctc
catgtcgatcccgaagcggtgaagcccgacccggctttgctgccgggcgcacagcctcac
gcctattccaacgcggccggcggcagtgacgccgtgccgttcttcggcgacgccgtgccg
gtcgatcccgagacggccgccgcacccgagcggacggatggggaggcgccgcccgaagcg
ggcgaggccgatcccttcgccgatctcgacctgccggatcaggctccgaagaagaagcgc
ggctccaacgagccgacgcccgcgaccctcgtggccgcccgcgcggcggaatcggtcaaa
ccgttcgatacggccgcctacgaaaccatcgccaccgtggcgcagctcgaggcctggatc
gccgagagctacgaggccggcgtgatcgcggtcgataccgagaccgacgcgctcgacgcg
gccaaggcgggactcgtcggcgtctcgctcgccaccgcgccggggcgggccgcctatatc
ccgctcgcccacgtgaagcccgaggtgaagggcggcgacctgttcggcgagagcggggca
ggagccgatgcgtccgacaggcagccgggccagatcgatttcgacaccgccctcaagctg
ctcaagccgctgctcgaggatgccggcacgctcaaggtcggacagaatctgaaatacgac
ctctcggtgctgcaccgctacggcatcgacgtgaggcccttcgacgacacgatgctgatc
tcctacgtgctcgatgccggcaagggcgggcacggcatggacgagctcgcccgccgccat
cttggccatcagccgatcaccttcgccgacgtcgccggcaccggccgcaacaaggtcacc
ttcgaccgcgtggcgatcgacaaggcgaccgcctacgcggcggaagacgccgacgtcacc
ttacgcctgtggcggatgatgaagccgcgtctcgtcgccgagcaccgggtgacggtctac
gagacgctggagcgtccgctggtgccagtgctggcgcggatggagcgggccggcatcgcc
atcgaccgcaacatgctgagccgtctctccggcgacttctcgcagatcctggcgcggctc
gaggaggagattcaggaggacgcgggcgagcggtttcaggtctcctcaccgaagcagatc
ggcgacgtgctgttcggcaagatgggcctgcccggcgcgaaaaagacgccgtccggtcag
tgggccacgcccgcgacgcttctcgaagagctggcccaggccggccacgacctgccgaag
aagattctcaactatcgccagctctccaagctgaaatcgacctacaccgactcgctgcaa
cagcacgccgaccgggggaccaaccgcgtccacacctcgttcgccctcgcggcgacgacg
accggccggctctcttcgtcggatccgaacctgcagaacatcccgatccgcacggaggag
gggcggcgcatccgccgcgccttcgtcgcgcccgagggtaagaagctgatctcagccgat
tacagccagatcgagctgcgcctgctcgcccacatcgccgacatcccgcaattgcgcgaa
gcgttcgagcagggaatcgacatccacgcggcgacggcgtcggccatgttcggcgtcgcc
ctcgaccagatgaccggcgacctgcggcgccgggccaagacgatcaatttcggcatcatc
tacggcatctcggccttcgggctggccgaccgcctcggcatcggccgcgaggaggcatcg
gccttcatcaagcagtatttcgagcggtttcccggcattcgcgactacatcgacaccacc
aagcgctcgtgccgcgagaagggctacgtcacgaccctgttcggccgcgtctgccactac
ccgcagatccgctcgaacaacccgtccgaacgggcgagcgtggagcggcaagccatcaac
gccccgatccagggcaccgccgccgacatcatccgccgcgccatgacgcggatggaggat
gcgctggaggccaagaagctcactgcgcggatgctgctgcaagtgcacgacgaactcgtg
ttcgaggtgcccgacgacgaggtcgaggcgacgatccccgtgatcgccggggtgatggaa
gaggcgcccgcgccggccctgacgctgagggtgccgctggtggtcgaggcccgggcggcg
ggcaactgggaagaggcgcactga
DBGET
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