Methylorubrum extorquens PA1: Mext_2497
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Entry
Mext_2497 CDS
T00640
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mex03016
]
Mext_2497
Enzymes [BR:
mex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mext_2497
Transfer RNA biogenesis [BR:
mex03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mext_2497
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABY30892
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All DBs
Position
2799528..2800157
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AA seq
209 aa
AA seq
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MAAAPSRIRLHHGDLPPDFAPGAAIAIDTETLGLNPHRDRLCVVQVSRGDGSADVVQIRP
GDPAPERLMAVLADAGVVKIFHFARFDLAVLFNAFGVMPAPVYCTKIASKLARTYTDRHG
LKDVVRELVGVDLSKQQQSSDWGAGTLSQAQIDYAASDVLHLHAARERLDAMLAREGRTE
MAQACFDFLPTRSKLDLAGWPEIDIFAHA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccccctcccggatccgcctccaccacggcgacctgccgcccgatttcgcg
ccgggcgcggcgatcgcgatcgataccgagacgctggggctcaacccgcatcgcgatcgg
ctctgcgtcgtgcaggtgtcccgcggcgacggcagcgccgatgtggtgcagatccggccc
ggcgacccggcgccggagcggctcatggcggtcctggccgatgccggggtcgtcaagatc
ttccacttcgcccggttcgatctggcggtgctgttcaacgcgttcggcgtcatgcccgct
ccggtctactgcacgaagatcgcctcgaagctcgcccgcacctacaccgaccgtcacggc
ctcaaggacgtggtgcgcgaactcgtaggcgtcgatctctccaagcagcagcaatcctcc
gattggggcgcggggaccctgagccaggcgcagatcgactacgcggcatcggacgtgctc
cacctgcatgccgcccgcgagcgtctcgacgccatgctggcccgcgagggccgcaccgag
atggcgcaggcctgtttcgacttccttccgacccgatccaagctcgatctcgccggctgg
ccggagatcgacatcttcgcccacgcctga
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