Methylorubrum extorquens PA1: Mext_2752
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Entry
Mext_2752 CDS
T00640
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mex01002
]
Mext_2752
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mex01011
]
Mext_2752
Peptidases and inhibitors [BR:
mex01002
]
Cysteine peptidases
Family C82
Mext_2752
Peptidoglycan biosynthesis and degradation proteins [BR:
mex01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Mext_2752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABY31143
LinkDB
All DBs
Position
complement(3081987..3083927)
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AA seq
646 aa
AA seq
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MRAASEAGTGIARTLSVALAALLAFSQAPARAEEAPAATESGVVIRKAAVDVANEPVVTP
DASNGAAPTVDAPPPPAEPAPAAEGPPAPVAPSEPLPAAVYARLNDTAPLLQRLTGKDRE
AIQAFYALGNFKPIWIENRAFTAAANAAIARLQEAGEDGLDPNAYPVPVVGKLSRPDTDA
EIAEADLKLSAALALYARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGAAAGDV
LQGYNPRQPGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDA
SAAGTLDSAPGEADAYDRSVADAVKNFQRSRGLPANGTLTRATVAALVNSSVPKTSASEA
DILVNMERWRWLPPELGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMM
EYAVVNPSWYVPPSILKQMLASGRTAGFEVVRRGGNISLRQPPGERNALGFIKFMFPNQH
AVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVLPTWTQERLKKLIGKGERTLRLP
EKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGLAARSEAVAKAPAKEKRASAEA
ARSAPRQAVAREAVRSERRAAPRRSSDMFGEPESAPTYAYPPRSYW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgcatcggaagccggaacgggcatcgcgcggaccctgtccgtcgcgctggcc
gccctcctcgctttcagccaagccccggcccgtgccgaggaagcgcctgccgcgacggag
tccggcgtcgttatccgtaaggccgctgtcgacgttgccaacgaaccggtggtcacgccc
gacgcctccaacggcgcggcaccgaccgtcgatgcgcctccgccccccgcagagcccgcg
cccgcggccgaggggccaccggccccggtcgcgccgagcgagccgcttccggcagcggtc
tatgcgcggctcaacgacaccgcgccgctgctgcaacggctgaccggcaaggaccgcgag
gcgattcaggctttctacgcgctcggcaacttcaagccgatctggatcgagaaccgggcc
ttcaccgccgccgccaacgcggccatcgcccgcctgcaagaagcgggcgaggacgggctc
gatccgaacgcctatcccgttccggtggtgggcaagctcagccgcccggacacggatgcg
gagattgccgaggccgacctcaagctctcggccgcgctcgccctctacgcccgcgacgcc
cgcggcggacgggtgaacccggccgcgatctcgaggctcatcacgcccaccctcgacctg
ccgccggccgacacggtgctgacccgtctcgccgcttcgggcgcggcggccggcgacgta
ctgcaaggctacaatccgcgccagcccggctatctcgccctgaagaagcgcctcgccggc
ttgcgtgccggccggacgcaaggggcgccgagcgtcaagcttcccgatgggccggtgctc
aagctcgggatgagcgacccccgcgtgccgttgctgcgcagccgcttcggcctcgacgcg
agcgccgccggcaccctcgattcggcgcccggcgaggcggatgcctacgaccgctccgtt
gccgatgccgtcaagaacttccagcgcagccgtggcctgccggcgaacggaacgctcacc
cgcgccaccgtcgcggcgctcgtcaattcgagcgtgccgaagacgagcgcgagcgaggcc
gatatcctcgtcaacatggagcgctggcgctggctgccgcccgaactcgggccgaactac
gtcttcgtgaacgtgcccgaattcaagctgaaggtgtttcgcgacgggcaggtgcgtgac
gaaacccgggtgatcgtcggcaagccgacgagcccgacgccgaccttctcggggatgatg
gaatacgccgtcgtcaacccgtcctggtacgtgccgccctcgatcctgaagcagatgctg
gcctcgggccgcaccgccgggttcgaggtggtgcgccggggcggcaacatctccctgcgc
cagccgccgggcgagcggaacgcgctcggcttcatcaagttcatgttccccaaccagcac
gcggtctacctgcacgacacgccgaaccgctcgctgttctccgcctcgacccgcgcgttc
agccacggctgcgtgcgcgtggacgacccgttccgcttcgccgacgcggtgcttccgacc
tggacgcaggaacgtctcaaaaagctgatcggcaagggcgagcggacgctgcgcctgcct
gagaagctgccggtgcacctcgcctacttcacggcggaagtggacgatctcggctcctac
cgcaccctgccggacctctatggctatgatgggccgatgaaggtcgcgctggggctcgcc
gcccgctcggaggccgtggcgaaagcgcccgcgaaggagaagcgcgcaagtgccgaggcc
gcccgctcggccccgcgccaagccgtggcgcgcgaggcggtgcgcagcgagcgccgcgcc
gccccccgccgttcgtcggacatgttcggcgagccggagagcgctcccacctacgcctat
ccgccgcgcagctattggtag
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