Methylorubrum extorquens PA1: Mext_3012
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Entry
Mext_3012 CDS
T00640
Name
(GenBank) Squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex00906
Carotenoid biosynthesis
mex01100
Metabolic pathways
mex01110
Biosynthesis of secondary metabolites
Module
mex_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Mext_3012
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mex01006
]
Mext_3012
Enzymes [BR:
mex01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Mext_3012
Prenyltransferases [BR:
mex01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Mext_3012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABY31401
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Position
3360383..3361444
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AA seq
353 aa
AA seq
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MPVFAPDPFAASAADRSACRAAIRAGSKSFFAASLLLPPSVRVSAYGLYAFCRLSDDAVD
EAGGNRAAALARLERRLTAACAGRPDNHPADRALAEVLARHAIPEKLPRALLEGLAWDTQ
GRRYDTLSELAAYAARVAGAVGAMMTLVMGVRDGPALARACDLGVAMQFTNIARDVGEDA
RAGRLYLPREWLDAAGIDPDAFLAEPRLGPSLQRVVAELLAAADELYARAEPGIAALPLS
CRPAIRAAGLIYAEIGRAVEANELDSVTRRARVTGARKAGLLATAILPAGGGQGLSAPPL
PETAFLVEAVTHHPVPAARRLPPWWNVSGQVVRVLDLIEVLEERDAFRRSAAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtttgcgcctgaccctttcgccgccagcgcggcggaccgctctgcctgccgg
gccgcgatccgcgccggctccaagagcttcttcgcggcctcgctgctgctgccgccctca
gtgcgggtctcggcctacggcctctacgccttctgccgcctttccgacgatgcggtggac
gaggcggggggcaaccgtgctgcggccctcgcccgcctggaacgacggctgacagcggcc
tgtgccggccggcccgacaaccacccggccgaccgggcgctcgccgaggtgctcgcccgc
cacgccatcccggaaaagctgccgcgggcgctgctcgaagggttggcctgggacacgcaa
ggccggcgctacgacaccctgtcggagctggccgcctatgccgcccgggtcgcgggcgcg
gtcggggcgatgatgacactggtgatgggggtgcgcgacggccccgcgctcgcccgcgcc
tgcgatctcggcgtggccatgcaattcaccaacatcgcccgcgatgtcggcgaggatgcc
cgcgccgggcgcctctacctgcctcgcgagtggctcgacgcggccggcatcgacccggac
gccttcctcgccgagcctcggctcggccccagcctgcaacgggtggtggccgagctgctg
gcggcggccgacgaactctacgcccgcgccgaacccggcatcgccgcgctcccgttgagc
tgccgcccggcgatccgcgccgccggcctgatctacgcggagatcggccgtgccgtggag
gcgaacgagctcgattcggtcacgcgccgcgcccgcgtcaccggcgcgcgcaaggccggg
cttctggccaccgcgatcctgcccgcgggcggcggccagggactatcggcgccgccattg
cccgagaccgccttcctcgtggaagccgtgacgcaccatccggtcccagccgcgcggcgc
ttgccaccgtggtggaacgtgtcggggcaggtcgtgcgggtgctcgacctgatcgaggtg
ctggaggagcgcgacgccttccgccgctcggccgcgtcgtaa
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