KEGG   Methylorubrum extorquens PA1: Mext_3425
Entry
Mext_3425         CDS       T00640                                 
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
mex  Methylorubrum extorquens PA1
Pathway
mex00300  Lysine biosynthesis
mex00470  D-Amino acid metabolism
mex01100  Metabolic pathways
mex01110  Biosynthesis of secondary metabolites
mex01120  Microbial metabolism in diverse environments
mex01230  Biosynthesis of amino acids
Module
mex_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mex00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Mext_3425
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Mext_3425
Enzymes [BR:mex01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Mext_3425
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ABY31811
LinkDB
Position
complement(3801726..3803021)
AA seq 431 aa
MTQAVSPDLAAALIAENFSRDASGVLRVGGLPLTELAKDFGTPLFVYDADTMRRTYRALC
AALAGFAEVDFSVKANPNPAVIRVFSQEGAGAEIASGAEFDAAIRAGVPPEKILFAGPGK
GAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVHVRVALRVNPGATAQGGAMRMGGK
PSPFGFDEEDIEAAIDTVEAEPRLRLIGLHLFAGTQGLKADTLLGQWAYGLGLAARIANR
IGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIATLRADPRLASARVVLEPGRYL
TGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLAAVTDAGGERA
ATAVVGPLCTPLDMLARAAPLPPLPEGDLVAVLQSGAYGLTASPTGFLSHPTPAEVLVDG
GEAREIRARGP
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgacccaggccgtctctcccgacctcgccgccgcgctgatcgccgaaaacttttcccgc
gatgcgagcggtgtgctgcgggtcggcggcctgccgctgaccgagctcgcaaaggatttc
ggcacgccgctcttcgtctacgacgccgatacgatgcgccggacctaccgggcgctgtgc
gcggcactcgccggcttcgcggaggtggatttttcggtcaaggcgaaccccaacccggcg
gtgatccgcgtcttctctcaggagggcgcgggggccgagatcgcctccggcgccgagttc
gacgccgcgatcagggcgggtgttccaccggaaaagatcctgttcgccggcccaggcaag
ggtgcggccgacctcgaccgggtgatcggcggcggcatcggcgaaatccatctcgaaaac
cgcgaggagattgttcgcgtcgcggcggcggctgagcgtcacggcgtgcacgtgcgggtg
gcgctgcgggtcaatcccggtgcgaccgctcagggcggggcgatgcggatgggcggcaag
ccttcgccgttcggcttcgacgaggaggacatcgaggccgccatcgacaccgtggaggcc
gaaccgcgcttgcgcctcatcgggctccacctgttcgcgggcacgcaagggctgaaggcc
gacaccctcctcggccagtgggcctacgggctcgggcttgcggcgcggatcgcgaaccga
atcgggcggccgctggagacgatcgatctcggcggcggcctcggcatcccgtacttttcc
ggcgacaccgccctcgatctcggcgcgatccgggccgggctgcccgacctgatcgccacc
ctgcgggcggacccgcggctggcgagcgcccgcgtggtgctggaacccggccgctacctc
accgggccggcgggcgtctacgtggcgcgggtgctggcggtgaaggaatcgcgcggcagc
cgcttcgtcatcaccgatggcggcatgcaccatcacctggccgcgagcggcaatctcggc
cagatcgtcaagcgcgacttccccctcgccgcggtgaccgatgcgggtggcgaacgcgcg
gcgacggcggtcgtcggcccgctttgcacgccgctggacatgctggcccgcgccgctccc
ctgccgccgctgcccgagggcgatctcgtcgcggtgctgcaatcgggcgcctacgggctc
accgcgagcccgacgggcttcctgagccacccgaccccggccgaggtgctggtggacggg
ggcgaggccagggagatccgggcgcgcgggccttga

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