Methylorubrum extorquens PA1: Mext_4088
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Entry
Mext_4088 CDS
T00640
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K10943
two-component system, response regulator FlrC
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex02020
Two-component system
mex02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mext_4088
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mext_4088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mex02022
]
Mext_4088
02035 Bacterial motility proteins [BR:
mex02035
]
Mext_4088
Two-component system [BR:
mex02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Mext_4088
Bacterial motility proteins [BR:
mex02035
]
Flagellar system
Flagellar assembly proteins
Others
Mext_4088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Response_reg
AAA_19
AAA
AAA_3
MCM
AAA_22
nSTAND3
AAA_2
AAA_30
AAA_7
HTH_Tnp_ISL3
ATPase
MerR
HTH_50
HTH_28
HTH_30
DUF2089
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
ABY32458
LinkDB
All DBs
Position
complement(4547558..4548931)
Genome browser
AA seq
457 aa
AA seq
DB search
MRLLIVGRLSSELVTASKMAMNRGASVTHADGIDQGLATLRAKGGDLVMVDVGLDIRRLV
QALSDERIRTPVVACGIASDARAAVAAIQAGAKEYIPLPPDPELIAAVLEAVAADARSFI
WRDPSMERVVRLAEQVARSEASVLITGESGTGKEVLARHVHAKSNRAGRPFVSVNCAAIP
EALLESELFGHEKGAFTGAVARRIGRFEEANGGTLLLDEISEMDVRLQSKLLRALQERVI
DRVGGAAPVKVDIRVLATSNRNLADEVKKGTFREDLYYRLNVVHLRLPALRERLADILEL
TAHFARKYAELNGLPLRPLAREAQALVARNPWPGNVRELENTIHRAVLLAQGAEIGPEAI
LSPEGESLAAPTAASGPVERAASAAEAATRGLVGRTVADVERDLILDTLDHCLGNRTHAA
RILGISIRTLRNKLNEYVEAGVKVAEPGGVRAMAAYG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctcatcgtcggacggctctcgagcgaactcgtcaccgcctcgaagatggcc
atgaaccggggcgcctcggtcacccacgccgacgggatcgaccaggggctcgcgaccctg
cgcgccaagggcggcgacctcgtcatggtcgatgtcgggctcgacatccgccggctggtg
caggccctgtccgacgagcgcatccgcacgccggtggtggcctgcggcatcgcctccgac
gcccgcgccgcggtggcggcgatccaggcgggcgccaaggagtacatccccctccccccc
gatcccgaattgatcgcggcggtcctggaggccgtggcggcggacgcccgcagtttcatc
tggcgcgatccgtccatggagcgcgtggtgcggctcgccgagcaggtcgcccgctcggaa
gcctccgtgctcatcaccggcgagagcggcaccggcaaggaggtgctggcccgccacgtc
cacgccaagtcgaaccgggcgggccgcccgttcgtctcggtcaactgcgcggcaatccct
gaggccctgctcgaatccgagctgttcggccacgagaagggcgccttcaccggcgcggtc
gcccggcgcatcggccggttcgaggaggccaatggcggcacgctgctcctcgacgaaatc
tccgagatggacgtgcggctgcaatccaagctgctgcgcgcgctgcaggagcgggtgatc
gaccgggtcggcggagccgcccccgtcaaggtggatatccgcgtgctcgccacctccaac
cgcaacctcgccgacgaggtgaagaagggcacgttccgcgaggatctgtactaccgcctc
aacgtcgtgcacctgcgcctgcccgccttgcgcgagcggctggccgacatcctcgaactc
accgcccatttcgcccgcaaatacgcggagctgaacgggctgccgctgcgtccgctggcc
cgcgaggcgcaggctctggtcgcccgcaacccctggcccggcaacgtgcgcgagttggag
aacacgatccaccgcgcggtgctcctggcgcagggggccgagatcggtccggaggcgatc
ctgagcccggagggcgaatcgctcgcggcgccgacggcggcctccggcccggtcgagcgg
gcggcgagcgcggcggaggcggccacccgcgggctggtcggacgcaccgtggcggatgtc
gagcgcgacctgatcctcgacaccctcgaccattgcctcggcaaccgcacccacgcggcg
cgcatcctcggcatctcgatccggacactgcgcaacaagctcaacgagtatgtcgaggcc
ggcgtgaaggtggccgagcccggcggcgtccgggccatggcagcctatggctga
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