Methylorubrum extorquens PA1: Mext_4190
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Entry
Mext_4190 CDS
T00640
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03030
DNA replication
mex03430
Mismatch repair
mex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mext_4190
03430 Mismatch repair
Mext_4190
03440 Homologous recombination
Mext_4190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mex03032
]
Mext_4190
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_4190
Enzymes [BR:
mex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mext_4190
DNA replication proteins [BR:
mex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mext_4190
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mext_4190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
NACHT
nSTAND3
Mg_chelatase
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ABY32559
LinkDB
All DBs
Position
complement(4660157..4661239)
Genome browser
AA seq
360 aa
AA seq
DB search
MRPDSARTARDARTEAEAGDLAHVPRPREQTRLFGHGHAEAAFAGALAAGRLHHAWLIGG
PAGIGKATLAYRVARRLVADPRTLPSPDSLDVPEDHPAARQVMALSHPNLVALRRVQAPG
AKTLPTRISVDAAREALALFGATAGGEGGWRVCIVDSAEDLNANSANALLKMIEEPPPRA
IFLIVSHAPGRLLPTIRSRCRALTLRALPEADVRAIIEEFPAPFARPDAAALARAVSLCE
GSVARAVALLDPATAAVEADVSALLAGLPEPDGRRVLKLAETLAGRDAEPLLATVLDAIQ
RHVATEIDRRQGEGPARLLALVEAAERIASSAREAAIYNLDRRPLVLAAFRELAAATRIP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgattccgcccggaccgcccgcgatgcccgcaccgaggccgaggcgggcgac
ctcgcccacgtcccgcgcccgcgcgaacagacccgccttttcgggcacggtcacgcggaa
gcggccttcgcgggggcgctggcggcgggtcggctccatcatgcgtggctgatcggcggt
cccgccggcatcggcaaggcgacgctggcctaccgggtcgcgcgccggctcgtggccgac
ccgcgcacgctcccctcccccgattccctcgacgtaccggaggatcacccggccgcgcgc
caggtgatggccctgtcgcacccgaatctggtcgcgctgcgccgggtccaggcgccgggt
gccaagacgctgccgacccgcatttcggtcgatgccgcccgcgaggcgcttgccctgttc
ggggccactgcgggcggggagggcggctggcgcgtctgcatcgtcgacagcgccgaggat
ctgaacgccaacagcgccaacgcgctcctgaagatgatcgaggagccgccgccccgcgcc
atcttcctcatcgtctcccacgcgccgggccgcttactgccgacgattcgctcgcgctgc
cgggccctgacgctgcgtgcgctgccggaggcggacgtgcgcgcgatcatcgaagaattt
ccggcgcccttcgcccggcccgacgcggcggctctggcgcgggccgtctcgctctgcgag
ggctcggtcgcccgcgcggtggcgcttctcgaccccgccaccgccgcggtcgaggcggac
gtctcggcccttctcgccggcctgcccgagccggacgggcggcgcgtgctcaaactggcc
gaaacgcttgccggccgcgacgccgaacccctgcttgccaccgttctcgacgcgatccag
cgccacgtcgccaccgagatcgatcggcggcaaggggaggggccggcccggctgctggcg
ctggtggaggccgccgagcgcatcgcgtcctcggcccgcgaggccgcgatctacaatctc
gaccgccggccgctggtgctcgcggcctttcgtgaattggcggcggcgacgcggattccg
tag
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