Methylorubrum extorquens PA1: Mext_4246
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Entry
Mext_4246 CDS
T00640
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mext_4246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mex03400
]
Mext_4246
Enzymes [BR:
mex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Mext_4246
DNA repair and recombination proteins [BR:
mex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mext_4246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABY32615
LinkDB
All DBs
Position
complement(4722708..4723679)
Genome browser
AA seq
323 aa
AA seq
DB search
METMTANHADTDARGDLISFLDFHVAAGVDAALDEQPHDRFAEAESVRADAASQAEPATR
REPLEPRREPLPPRSEPPRRDAPSAEEPPLAFRRELPSRDAPTREPPRTYGNAAGAKPGE
AADDARARAAQMKTLDELEELLRGFEGCGLRFTAKNLVFADGNPQARVMFVGEAPGADED
RIGKPFMGRSGQLLDRMMAAIGLDRTSAYISNVVPWRPPGNRNPTPQEISICRPFVERQI
ELANPDILVCLGAPATQTLTGTKDGILKARGRFYPYRLGDGREIRALATLHPAYLLRQPV
QKRLAWRDFRMLKSALDGSAAGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgatgacggcaaaccacgcggataccgacgccagaggcgacctgatctccttc
ctcgacttccatgtcgcggcaggcgtcgacgcggccctcgacgagcagccccacgaccgc
ttcgccgaggccgagtccgttcgggctgacgccgcctcgcaggccgagccggccacgcgc
cgcgagccccttgaaccacgccgcgaacctcttccaccgcgcagcgagccgccgcggcgt
gacgctccctccgcggaagagccgcccctggcgttccggcgtgagctgccgagccgcgac
gcgcccacgcgcgagccccctcgcacctatggcaacgcggccggcgccaagcccggcgag
gcggcggacgatgcgcgggcacgggccgcgcagatgaagactctcgacgaactggaagag
ctgctgcgcggcttcgagggctgcggcctgcgcttcaccgccaagaacctcgtcttcgcc
gacggcaatccgcaggcgcgggtgatgttcgtcggcgaggcgccgggggccgacgaggac
cggatcggcaagccgttcatgggacgctccggccagcttctcgaccggatgatggcggcg
atcggcctcgaccggaccagcgcctacatctccaacgtggtgccctggcgcccgccgggc
aaccgcaatccgaccccgcaggagatctcgatctgccgccccttcgtcgagcgtcagatc
gaactcgccaaccccgacatcctcgtctgtctcggtgcgcccgcgacgcagacgctgacc
ggcaccaaggacggcatcctcaaggcgcgcggacgcttctacccgtatcgcctcggcgac
ggccgcgagatccgggcgctcgccaccctccatccggcctacctgctgcgccagccggtg
cagaagcgcctcgcttggcgcgacttccggatgctgaagagtgccctcgacgggagcgcc
gcgggcaagtag
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