Methylorubrum extorquens PA1: Mext_4394
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Entry
Mext_4394 CDS
T00640
Name
(GenBank) helicase domain protein
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
mex
Methylorubrum extorquens PA1
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mex03029
]
Mext_4394
Enzymes [BR:
mex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mext_4394
Mitochondrial biogenesis [BR:
mex03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Mext_4394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
CBP66_1st
Yae1_N
Motif
Other DBs
NCBI-ProteinID:
ABY32762
LinkDB
All DBs
Position
complement(4886892..4890314)
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AA seq
1140 aa
AA seq
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MTLRTLHREARARGVTAVLGPTNTGKTHMAIERMLLHPTGMIGLPLRLLAREVYLRVVAK
VGSENVALITGEEKIKPDRPRYWICTIEAMPRDLDVAFVAIDEIQLAADMDRGHVFTDRL
LYRRGREETLLIGSSTMLPLVQALIPGVQTTTRPRLSSLTFAGEKKISRLPHRTAIVAFS
AEEVYAIAELIRRQRGGAAVVLGALSPRTRNAQVELYQSGDVDYLVATDAVGMGLNLDVD
HVAFAANWKYDGTRFRKLSPAEMGQIAGRAGRHIADGTFGSTGRCPPFEPEMVEALETHD
FEPVRMLQWRNPDLEFASLERLQASLDEHPHEQGLTRAPMGEDQQALEILMREDDIRDMA
KGPAAVRRLWDTCGVPDYRKVHPQTHADLVAQLYRFLMRGMAGRIPNDWFARHVAMIDRT
DGDIDALSQRIAQGRTWTFVANRPDWLLDPLHWQGETRRVEDRLSDALHERLASRFVDRR
TSVLMRRLREKTMLEAEITSGGDVTVEGQHVGRLHGFQFVPDPQAEGHEAKTLRSAADKA
LAGEIEARADRFASAADASLVLSHDGIIRWTGDPVAKLTPGDKLFEPGIRLIADDSLSGA
AREKVETRLAAWLRAHVVRLLGPLMEIETAADLTGLARGIGYQVVEALGVLERAKVAHEM
RTLDQDGRANLRRHGVRFGAYHIFLPALLKPAPRTLAAQLWALKNGGLDQPGLDEIAHLA
SSGRTSIKVDQNIAKGLYRAAGFRVCGERAVRVDILERLADLIRPAIAYRPGTTPGEPPA
GTADGDGFVATVNMTSLVGCSGEDFASILKSLGYVAQNRPGPAITVPLVAAAPTVPAART
AEAAPQETAGEEAADEATATEATSVEETPAEETAQARSQDATDVGATAEPSDEAAPAEAT
SEAGGEAETVAAEAEPAAEETAAAPVEAVAPVEESAPGEAGTADAAPEAAAPMPAETADA
AQAAAATGEVEAVDAADSAIPADEPSTEADAAAEPAAPETVEVWHLHRPQRHTGPRPGRG
QGRPEGRQDGRQEGRQDGRQDGRQDGRRNDGPRRPREDRPEGGRPARADGRPDSRREGQG
EGGPRREHQGGRNRPDRRDENRRPNPEQRPPRRERQPDPDSPFAALAALKAKLESDGGKR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccgcacccttcaccgcgaggcccgcgcgcgcggggtcacggcggtgctcggc
ccgaccaacacgggcaagacgcacatggccatcgagcggatgctgctgcatccgaccggc
atgatcggcctgcctctcaggctcctggcccgcgaggtctacctgcgcgtggtcgccaag
gttgggtccgagaacgtcgccctcatcaccggcgaagagaagatcaagccggaccggccg
cgctactggatctgcaccatcgaggcgatgccgcgcgatctcgacgtcgccttcgtcgcg
atcgacgagatccagctcgccgccgacatggaccgcggccacgtcttcaccgatcgcctg
ctctaccggcgcggccgcgaggagacgctgctgatcggctcctcgaccatgctgccgctg
gtgcaggcgctgatccccggcgtgcagacgacgacgcgcccgcgtctctcgagcctgacc
ttcgcgggcgaaaagaagatctcgcggctgccgcaccgcacggcgatcgtcgccttctcg
gccgaggaggtctacgccatcgccgagttgatccggcgccagcgcggcggcgcggcggtg
gtgctcggcgcgctctcgccccgcacccgcaacgcccaggtcgaactctatcaatcgggc
gacgtcgattacctcgtcgccaccgacgcggtcggcatggggctcaacctcgatgtcgat
cacgtcgccttcgccgcgaactggaaatacgacggcacccggttccgcaagctgtccccg
gccgagatgggccagatcgccgggcgcgccggccgccatatcgccgacggcacgttcggt
tcgacggggcgctgcccgcccttcgagccggagatggtcgaggcgctggagacgcacgac
ttcgaacccgtgcgcatgctgcaatggcgcaacccggacctcgaattcgcctcgctggaa
cggctgcaggcgagcctcgacgagcatccgcacgagcagggcctcacccgcgcgccgatg
ggcgaggaccagcaggcgctagagatcctgatgcgcgaggacgacatccgcgacatggcc
aagggccccgcggcggtgcgccgcctctgggacacctgcggcgtgccggactatcgcaag
gtccacccacagacccatgccgacctcgtggcccagctctaccgcttcctgatgcgcggc
atggcggggcgcatccccaacgattggttcgcccgccacgtggcgatgatcgaccgcacc
gacggcgacatcgacgccctgtcccagcgcatcgcgcaagggcggacctggaccttcgtg
gcaaacaggcctgactggttgctcgatcctctgcattggcagggcgagacgcgtcgggta
gaggacagattgtccgacgccctgcacgagcgcctcgcgagccgcttcgtcgataggcgc
accagcgtcctgatgcggcgcttgagagagaagacgatgctggaagccgaaatcacctcc
ggcggtgacgtcaccgtcgagggtcaacatgtgggccgtcttcacggcttccaattcgtg
cccgacccgcaagccgagggccacgaagccaagaccctgcgctctgccgccgacaaggcg
ctggccggcgagatcgaggcgcgggccgaccgcttcgcctcggccgccgatgcctcactg
gtgctctcgcatgacggcatcatccgctggaccggcgatcccgtcgccaagctgacgccg
ggcgacaagctgttcgagcccggcatccgcctcatcgccgacgacagcctgtccggcgcc
gcgcgcgagaaggtcgagacgcggctggccgcatggctgcgcgcccacgtcgtgcgcctg
ctcgggccgctgatggagatcgagacggcggccgacctcactgggctcgcccgcggcatc
ggctaccaggtggtcgaggcgctcggcgtgctggagcgggccaaggtggcgcatgagatg
cgcaccctcgatcaggacgggcgggcgaatctgcgccgtcacggcgtccgcttcggcgcc
taccacatcttcctgccggcactgctgaagccggccccgcgtacgctcgccgcccagctc
tgggcgctgaagaacggcggcctcgaccagcccggcctcgacgagatcgcgcatctggcc
agttccggccgcacctcgatcaaggtcgatcagaacatcgccaagggcctctaccgcgcc
gccggcttccgcgtctgcggcgagcgggcggtgcgcgtcgatatcctggagcggctcgcc
gacctgatccgcccggccatcgcctaccgccccggcacgaccccgggcgagccgccggct
ggcaccgcggacggcgacggcttcgtggccaccgtgaacatgacctcgctcgtcggctgt
tcgggcgaggatttcgcctcgatcctgaagtcgctgggctacgtcgcgcagaaccgtccc
ggcccggccatcacggtgcccctggtcgcggcggcaccgaccgtccccgccgcgcgcacc
gccgaggccgcaccgcaggagacggcgggcgaagaggcagccgacgaggcgacggcgacc
gaggcgacatcggtcgaagagacgcccgccgaggagacggctcaggcgcgatcgcaggac
gcgaccgacgtcggtgccacggccgagccgagcgacgaggcggcgcctgccgaggcgacg
tccgaggccgggggcgaagccgagacggtcgccgccgaagccgagcccgccgcggaagag
acggccgccgcaccggtcgaagccgttgccccggtcgaggaatcggcaccgggcgaggcc
gggacggctgatgcggctcccgaagccgccgcgccgatgccggccgagaccgccgacgcc
gcgcaggcggctgccgcgaccggagaggtcgaggcggtggacgcggccgattcggcaatt
ccggccgatgagccctccacggaggcggatgccgccgccgagccggccgcgcccgagacc
gtcgaggtctggcatctgcaccgtccgcaacgtcacaccggtccgcggcccggccgcggc
cagggacggccggaggggcgccaggacggaaggcaagagggcagacaggacggccgccag
gatggtcgccaagatggtcggcgtaacgacggcccgcgccgtcctcgcgaggaccgtccg
gaaggcggacgtccggcccgtgccgacggcaggcccgacagccgccgggaaggccagggc
gagggcggccctcgccgcgagcatcagggcggccgcaaccgccccgaccgccgcgacgag
aaccgccgccccaaccccgagcagcgcccgccgcgccgcgagcgccagcccgatcccgat
tcgcccttcgcggcgctcgccgcgctgaaggcgaagctcgaatcggacgggggcaagcgc
tga
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