Methylorubrum extorquens PA1: Mext_4782
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Entry
Mext_4782 CDS
T00640
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mex
Methylorubrum extorquens PA1
Pathway
mex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mext_4782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mex03019
]
Mext_4782
03110 Chaperones and folding catalysts [BR:
mex03110
]
Mext_4782
03029 Mitochondrial biogenesis [BR:
mex03029
]
Mext_4782
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mex04147
]
Mext_4782
Enzymes [BR:
mex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mext_4782
Messenger RNA biogenesis [BR:
mex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mext_4782
Chaperones and folding catalysts [BR:
mex03110
]
Heat shock proteins
HSP60 / Chaperonin
Mext_4782
Mitochondrial biogenesis [BR:
mex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mext_4782
Exosome [BR:
mex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mext_4782
Exosomal proteins of other body fluids (saliva and urine)
Mext_4782
Exosomal proteins of breast cancer cells
Mext_4782
Exosomal proteins of colorectal cancer cells
Mext_4782
Exosomal proteins of bladder cancer cells
Mext_4782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABY33150
LinkDB
All DBs
Position
complement(5341727..5343367)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVRFSADARDKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADRFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKYVAAGINPMDLKRGI
DLATAAAVKDITARAKKVASSEEVAQVGTISANGDKEIGEMIAHAMQKVGNEGVITVEEA
KTAETELDVVEGMQFDRGYLSPYFVTNAEKMVAELEDPYILIHEKKLSSLQPMLPVLEAV
VQTGKPLVIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGQT
ISEDLGIKLENVALPMLGRAKRVRIEKETTTIIDGLGEKADIEARVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALL
LAKKAVAELKSDIPDVQAGIKIVLKALEAPIRQIASNAGVEGSIVVGKITDNGGETFGFN
AQTEEYVDMIQAGIVDPAKVVRTALQDAASVAGLLVTTEAMVADAPKKDSGAPAMPGGGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagacgtacgtttctccgccgatgctcgcgacaagatgctgcgcggcgtc
gacatcctcgcggatgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtgatc
gagaagagcttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgccgaccgcttcgagaacatgggcgcacagatggtgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcaccaccaccgcgaccgtgctggcccaggccatcgtc
cgcgaaggcgccaagtacgtcgccgccggcatcaacccgatggacctgaagcgcggcatc
gacctcgccacggccgccgcggtgaaggacatcaccgcccgcgccaagaaggtcgcctcc
tccgaagaggtcgcccaggtcggcacgatctccgccaatggcgacaaggagatcggcgag
atgatcgcccacgccatgcagaaggtgggcaacgagggcgtcatcaccgtcgaggaggcc
aagaccgccgagaccgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctc
tcgccgtacttcgtgaccaacgccgagaagatggtcgccgagctcgaggatccctacatc
ctcatccacgagaagaagctctcctcgctgcagccgatgctgccggtgctcgaggccgtg
gtgcagaccggcaagccgctcgtcatcatcgccgaggacatcgagggtgaggcgctcgcc
acgctcgtcgtgaacaagctgcgcggcggcctcaaggtcgcggccgtgaaggctccgggc
ttcggtgatcgccgcaaggcgatgctcgaggacatcgcgatcctcaccaagggccagacc
atctccgaggatctcggcatcaagctcgagaacgtcgccctgccgatgctcggccgcgcc
aagcgcgtccgcatcgagaaggagaccaccacgatcatcgacggtctcggcgagaaggcc
gacatcgaggcccgcgtcggtcagatcaaggcgcagatcgaggagaccacctcggactac
gatcgtgagaagctccaggagcgtctggccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtcaaggagaagaaggatcgcgtggacgacgcgctc
aacgccacccgcgctgcggtggaagagggcatcgtccccggcggcggcgtcgcgctgctc
ctggccaagaaggcggtcgccgagctgaagtccgacatcccggacgtccaggccggcatc
aagatcgtcctcaaggcgctcgaagccccgatccgtcagatcgccagcaacgcgggtgtc
gagggctccatcgtcgtcggcaagatcaccgacaacggcggcgagaccttcggcttcaac
gcccagaccgaagagtatgtcgacatgatccaggccggcatcgtcgacccggccaaggtc
gtgcgcaccgcccttcaggacgcggcctcggtcgccggcctgctggtgaccacggaagcc
atggtcgccgacgcgccgaagaaggacagcggcgctccggcgatgccgggcggcggcggc
atgggcggcatggacttctaa
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