Martelella endophytica: TM49_03065
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Entry
TM49_03065 CDS
T03801
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mey03016
]
TM49_03065
Enzymes [BR:
mey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TM49_03065
Transfer RNA biogenesis [BR:
mey03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TM49_03065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AJY44895
UniProt:
A0A0D5LLT6
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All DBs
Position
complement(671232..671828)
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AA seq
198 aa
AA seq
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MPRIFTALEIPREQALSLSLLRGGLPGARWIDVENYHITLRFIGDVDFRTADEVVHWLDR
IERPSFQLNLTGTGAFGSKKPHAIWAGVSPSPDLFALQGEIDRICQRLGLKADPRKFSPH
VTLARLRGSRVQDVVEYLSARGNFHTLPFTAARFVLLSSRDSVGGGPYKVEEAFELYDPM
DDAWSFESNDWQPVKSMW
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaattttcaccgccctcgaaatcccgcgcgaacaggcgttgagtctttcgctt
ctgcgcggcggcctgcccggggcccgctggatcgatgtggagaattaccacatcactctg
cggttcatcggcgatgtcgactttcgcaccgccgatgaagtggtccactggctcgaccgg
atcgagcgtccctccttccagctcaacctcaccggaaccggcgccttcggcagcaagaag
ccgcatgccatctgggccggtgtatcgccgtcacccgatctttttgcgctgcagggcgaa
atcgaccgcatctgccagcggctcgggctgaaggccgatcctcgcaagttctcgccgcat
gtgacgctggcgcggctgcgcggttcgcgggtccaggatgtcgtcgagtatctttccgcc
cgcggcaatttccacacgctgccgttcaccgcggcccggttcgtgctgctgtcgtcgcgt
gattccgtcggcggcggcccctacaaggtcgaggaggcctttgagctctacgatccgatg
gatgacgcctggagctttgaaagcaatgattggcagcccgtgaagagcatgtggtag
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