Martelella endophytica: TM49_04715
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Entry
TM49_04715 CDS
T03801
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mey03019
]
TM49_04715
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TM49_04715
Messenger RNA biogenesis [BR:
mey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TM49_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
AAA_16
AAA_30
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AJY45151
UniProt:
A0A0D5LLX0
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All DBs
Position
1029851..1032304
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AA seq
817 aa
AA seq
DB search
MPEDALPVAEVLDMLSSALAGRGLAVLSAPPGAGKTTLVPLHLLQSGAAGNGRIILLEPR
RLAASAAAFRMASLLGEEPGGTVGYRMRLDTRVSARTRIEVVTEGVFARMALDDPELAGV
STVIFDEFHERSLDADFGLALALDIRSGLREDLKLLVMSATLDVGRIASLLGDAPVIESA
GRAYPVDIRHRPRTPQGRIEDDVVAAILDMLKVEAGSILAFLPGQAEIRRTAERLEHRIG
SDVTLAPLYGNLTRAEQDAAIAPTQPGRRKVVLSTAIAETSITIDGVTIVIDSGLQRLPV
FEPATGITRLETVKVSRASADQRAGRAGRTAPGIALRLWHEGQTAALAAFTRPEILASDL
SGLVLDLAHWGVADPGQLAFLDPPPGPALAEAKRLVGALGALDDDGRLTPTGERMRGLSL
PPRLAAMVIHAAAAGTARDAAMLAVLLSEQGLGGNGADLSERLRRFRHERSPRADAARGL
ADRIAKAAGEAGRSNTATDAGALLIHAFPDRIAMARGGRGRFLMANGRGAEVPEDDPLAG
EPFLVIADLTGQAARGRVLAAAPVSRGTIEAERGDQIETVEECVFDRASLSVRARTVTRL
GALVLAEQAGVRPKGERAATALAEGLATHGLSLIDMPKEAAHLIERIGFLHRKLGEPWPN
VSPEGLLLSLDRWFTPFQSGVTAISAITAKSLVSGIQALLPYPLAADLDRLAPTHFTAPT
GDRLPIRYDGDEPVLAIRVQMLYGLKRHPVIAGGVPLLLELTSPAGRPIQTTRDLTGFWA
GSWKDVRADMRGRYPKHLWPEDPANAEATRRAKPRGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagacgcgcttcccgttgccgaagtgctcgatatgctctcgtcggcgctcgcc
ggccggggccttgccgtgctttccgctccccccggcgccggcaagaccacgctggtgccg
ctgcatctcttacaaagcggcgcggcgggcaatggcaggatcatcctgcttgaaccgcgc
cggcttgccgcgagcgccgcagccttccggatggcatcgcttctcggcgaggaacccggc
ggcacggtcggctatcgcatgcggctcgacacgagggtctcggcaagaacccgtatcgag
gtggtgaccgaaggcgtgttcgcgcgcatggcgctcgacgacccggagcttgccggcgta
tcgacggtcatcttcgacgagttccacgagcgctcgctcgatgccgatttcgggctggcg
ctggcgctcgacattcgctccggcctgcgcgaagacctgaaactgctggtgatgtcggca
acactcgatgtcggacggatcgccagccttctgggcgatgcgccggtgatcgagagcgcc
ggccgcgcctatccggtcgacatccgccaccggccgcgcaccccgcagggccggatcgag
gacgatgtcgtcgccgccatcctcgacatgctgaaggtggaagccggctcgatccttgcc
ttcctgccggggcaggccgagatccgccgcacggcggagcggctcgagcaccgcatcggc
tcggatgtgacgctcgcgcccctttacggcaacctgacccgcgccgagcaggacgcggcg
atcgcgccgacccagcccggacgccgaaaggtcgtgctctcgaccgcgattgcggaaacc
tcgatcaccatcgacggtgtcaccatcgtcatcgacagcgggctgcagcggctgccggtg
ttcgagcccgcgaccggcattacccggcttgagacggtaaaggtgtcgcgcgcctccgcc
gaccagcgagccggccgcgccgggcgaacggcgccggggattgcgcttcggctctggcac
gaggggcagacggcggcgcttgcagccttcacccggcccgaaatcctggcaagcgatctt
tcgggcctggttctcgatctcgcgcattggggcgtcgccgaccccggccagcttgccttc
ctcgatcccccgcccggccccgcgctggccgaagcgaaacggctggtcggcgcgcttggt
gcactcgacgacgatggccggctgacgccgacgggcgagcgtatgcgcgggctttcgctg
ccgccgcggctcgccgccatggtcatccatgccgccgcagccgggacggcgcgtgatgcc
gcaatgctcgccgtgctgctttccgaacaggggcttggcggcaacggcgccgatctttcc
gagcggctgcggcgcttccgccacgagcgctcgccccgggcggacgccgcgcgcggactt
gccgaccgcatcgccaaggccgccggcgaagcgggtcgttcgaacacggccacggatgcc
ggcgcgctgctcatccatgcctttcccgaccggatcgccatggcgcgcggcgggcgcgga
cggttcctgatggcaaacgggcggggggcggaggtgccggaagacgacccgctggcgggc
gagccctttctggtgatcgccgatctcaccggccaggcggcgcgcgggcgcgtgctcgcc
gccgcgcccgtttcacgtggaaccatcgaggccgaacgcggcgatcagatcgaaaccgtc
gaagaatgcgtcttcgatcgggcaagcctttcggtgcgcgcccgcacggtcacacggctc
ggcgccctggtgctcgccgaacaggcaggcgtccggccgaagggcgaaagggcggcaacc
gcactcgctgagggtctggccacccacgggctgtcgctgatcgacatgccgaaggaggcg
gcgcatctcatcgagcgcatcggctttctccatcgcaaacttggcgaaccctggccgaat
gtcagcccggaggggttgcttttgagcctcgaccgctggttcacgccgttccagtcgggc
gtgaccgcgatttcggcgattacggcgaaaagcctcgtcagcgggattcaggcgcttctg
ccctacccgcttgccgccgatctcgatcggttggcgccgacgcatttcaccgcccccaca
ggcgaccgcctgccgatccgctatgatggcgacgagccggtgctggcgatccgggtgcag
atgctctacgggctgaagcgccatccggtgattgccggtggcgtgccgctgctcctggag
ctcacctcacccgccggccggccgatccagacgacacgcgacctcaccggcttctgggcc
ggctcgtggaaggatgtgcgcgccgacatgcgcgggcgctatcccaagcatctctggccg
gaggacccggccaatgccgaggcgacgcggcgcgccaaaccgcgcggaacgtga
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