Martelella endophytica: TM49_08310
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Entry
TM49_08310 CDS
T03801
Name
(GenBank) hypothetical protein
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
mey
Martelella endophytica
Pathway
mey02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM49_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mey03000
]
TM49_08310
Transcription factors [BR:
mey03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
TM49_08310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
bact-PGI_C
HTH_28
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AJY45683
UniProt:
A0A0D5LQR4
LinkDB
All DBs
Position
complement(1821234..1821905)
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AA seq
223 aa
AA seq
DB search
MKTADGLFPVVKRMATAFGFRHVTFLDFPDSGSEKIVPLVHMTTLPIPLLNVYDAAGLLP
TSPIAATARKRPAAPLQWQLQELIDPSDEARAPVRKRMERMRMSMGIICSVPSPQGRLAV
LFLGDRRPLTTEEERDLAVLAERAANRFEELSNESSRSHTLLSARELEVVRWSAEGKTSS
EIGCIIGLSDHTVNAYLANAIRKLDCVNRTQLVAKAIRLKLID
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacggccgacggcctgtttccggtcgtcaagcgtatggccaccgcattcggcttc
cggcatgtcaccttcctcgatttccccgacagcggctcggaaaagatcgttccgctcgtc
cacatgacaacgctgccaattccgctgcttaatgtctatgacgctgccggattactgccg
acttcgcccatcgcggcgacggcgcgaaagcgcccggcggcgccgcttcagtggcagttg
caggaactgatcgacccctctgatgaggcacgcgcccccgtccgcaagcgcatggagcgc
atgcggatgagcatggggatcatctgttcggtcccctcgccacagggcaggctcgccgtc
ctttttctcggagaccggcggccgctgacgacggaggaagagcgcgacctcgccgtactg
gccgagagggcggcgaaccgcttcgaggaactcagcaacgaatcatcccgatcgcacacc
ttgctctcagcacgagaactggaggtcgttcgctggtcggccgagggcaagacatcgtcc
gagatcggctgcattatcgggctttcggaccatacggtgaacgcctatctcgccaatgcc
atccgtaaactcgattgcgtgaaccgcacgcaactcgtggccaaggccatccgcctgaag
ctgatcgactga
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