Martelella endophytica: TM49_10955
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Entry
TM49_10955 CDS
T03801
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mey
Martelella endophytica
Pathway
mey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TM49_10955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_10955
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM49_10955
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TM49_10955
RecFOR pathway proteins
TM49_10955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_3
AAA_14
Rad17
AAA_16
AAA_2
nSTAND3
AAA_18
AAA_17
ResIII
RNA_helicase
AAA_33
TsaE
AAA_28
AAA_24
DUF815
NTPase_1
ABC_tran
IstB_IS21
NB-ARC
Sigma54_activ_2
Bac_DnaA
Cytidylate_kin
AAA_7
NACHT
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AJY46075
UniProt:
A0A0D5LQ57
LinkDB
All DBs
Position
2415595..2416629
Genome browser
AA seq
344 aa
AA seq
DB search
MNDESRLISPDKRGEDLDAALRPQTLDDFTGQAEARANLKVFIEAAKRRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLN
FYTVEELEGIIRRGARLMGLTMSDDGAREIARRARGTPRIAGRLLRRVRDFAEVADAGEV
SRAIADEALTRLEVDHMGLDQLDRRYLNMICQHFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGLIQRTPRGRVMTATAWKHLGLNPPKEIDQFRLFDEGE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaaagccgcctgatatcgcccgacaagcgcggcgaggaccttgacgcggcc
ctcaggccgcagacgcttgacgattttaccggtcaggcggaagcgcgcgcgaacctgaag
gtgttcatcgaggcggccaagcgccgtggtgaggcgctggaccatgtgctgttcgttggt
ccgccggggctgggcaagaccacgctggcgcagatcatggccaaggaactcggcgtcaat
ttccgctccacctccggacccgtgatcgccaaggccggtgacctggcggcgcttttgacc
aatctcgaagaacgcgacgtgctgttcatcgatgaaattcatcggctgagtcctgcagtc
gaggaaatcctttatccggcgatggaagattttcagctcgacctgatcatcggcgagggg
cctgcggcgcggtcggtgaagatcgatctgtcgaaattcactctggtcgccgcgaccacg
cgtcttggcctgctgacgacaccgctgcgcgatcgtttcggcattcccgtgcggctcaat
ttctacacggtcgaggaactggaaggcatcattcgtcgcggcgcgcggctgatggggctt
accatgagcgatgacggcgcccgcgagattgcccgccgggcccgcgggacgccgcgcatt
gccggcagacttctgcgccgcgtgcgcgattttgcggaagtggccgatgccggtgaagtc
tcgcgcgcaatcgccgacgaggctctgacacggcttgaggtcgaccatatgggcctcgac
cagctcgaccggcgctacctcaacatgatctgccagcatttcggtggcggtccggtgggc
atcgagacgattgcggcgggactctccgaaccgcgcgatgcgatcgaggacatcatcgag
ccctacatgatccagcagggcctgatccagcgcacgccgcgcgggcgagtgatgaccgca
actgcctggaaacacctcggcctcaatcccccgaaggaaatcgaccagttccggctgttc
gacgagggcgagtga
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integrated database retrieval system
