Martelella endophytica: TM49_10975
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Entry
TM49_10975 CDS
T03801
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mey03016
]
TM49_10975
Enzymes [BR:
mey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TM49_10975
Transfer RNA biogenesis [BR:
mey03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TM49_10975
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AJY48128
UniProt:
A0A0D5LXF5
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All DBs
Position
complement(2419368..2420513)
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AA seq
381 aa
AA seq
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MIETTAALEEACVKLAKSDFVTVDTEFIRESTFWPELCLIQMASPDLEVLVDPLAKGLDL
KPFFALMADPSVVKVFHAARQDLEIVYHLGNMLPAPLFDTQVAAMVCGFGDSISYDQLVS
RLTGAHIDKSSRFTDWRARPLDDKQLSYALADVTHLRDVYLKLKEELEREGRTDWVEEEM
AILETPETYDLPPEKAWTRLKLRIKKPLDFAVMQKVAEWRENEARDRDVPRRRVLKDDAI
YEIAQQHPTEPEALAKLRMIPKGWERSQSAAGLMEAVKMALAIPKADLPRLPRQPQLPEG
AAAASELLKVLLKIVAEQNQVAARVIASSEDLDKIASDGENADVEAMRGWRRKLYGEPAL
QLLNGEVALRFVERKVEMISV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccactgccgctctcgaagaggcttgcgtcaagctcgccaaatccgatttt
gtcaccgtcgacaccgaattcattcgcgaaagcacgttctggccggagctttgcctgatc
cagatggcaagtcccgatctcgaagtgctggtagacccgctggccaagggccttgatctg
aagccgtttttcgcgctgatggccgatccgtccgtggtgaaggtgtttcacgccgcccgg
caggatctggagattgtctatcacctcggcaatatgctgccggcgccgctgttcgacacg
caggttgccgcgatggtctgcggctttggcgacagcatctcctatgaccagctcgtctcg
cgcctgaccggcgcgcatatcgacaaatcctcacgctttaccgactggcgcgcccgcccg
ctcgacgacaaacagctttcctatgcgctggccgacgtcacccatctacgcgacgtctac
ctgaagctgaaagaggagcttgagcgcgagggccgcaccgactgggtggaagaggagatg
gcgatcctggagacgccggagacctatgacctgccgccggaaaaggcctggacgcggctg
aagctccggatcaagaaaccgctcgacttcgccgtgatgcagaaggttgccgaatggcgc
gagaacgaggcgcgcgatcgcgacgtcccgcgccgtcgggtgctgaaagatgacgcgatc
tacgagattgcgcagcagcatccgaccgagccggaggcgttagcaaagctgcgcatgatc
cccaagggctgggagcggtcgcaatctgccgccgggctgatggaggcggtgaagatggcg
cttgccatcccgaaggccgatctgccgcgtctgccgagacagccgcagctgcccgagggc
gccgccgcggcatcagaactgctgaaggtgctgctcaagatcgtcgccgagcagaaccag
gttgctgcccgcgtcatcgcctcttcggaagacctcgacaagatcgcctccgatggcgag
aacgccgatgtcgaagccatgcgcggctggcgccgcaagctctatggcgagccggcgctg
cagctgctcaacggcgaggttgccctgcgcttcgtcgagcgcaaggtcgagatgatttcg
gtctga
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