Martelella endophytica: TM49_18150
Help
Entry
TM49_18150 CDS
T03801
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mey
Martelella endophytica
Pathway
mey03030
DNA replication
mey03430
Mismatch repair
mey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TM49_18150
03430 Mismatch repair
TM49_18150
03440 Homologous recombination
TM49_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mey03032
]
TM49_18150
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_18150
Enzymes [BR:
mey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TM49_18150
DNA replication proteins [BR:
mey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TM49_18150
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TM49_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AJY48331
UniProt:
A0A0D5LWE9
LinkDB
All DBs
Position
complement(3927933..3931427)
Genome browser
AA seq
1164 aa
AA seq
DB search
MAGMDARRDETADADARAVSFVHLRVHSAYSLLEGALPLKTVLKRAVADCQPAIAVTDTN
NLFGALEFAQKAVGEGLQPIIGCQLSIDMEDGSDGERRGGSHLPVKLPSIVLLVSNPEGY
ANLLDLVGEAYLGGNGNDSVHIKSSWLEGRTEGLIALSGGPGGPIDQPLALGFEEKAIDR
LSRLKALFGDRLYVEVQRHGEYDVQQERRVLKLAYDLDLPLVATNEPFFPAREDFEAHDA
LMAVAHNAIVSDDRRFRLTPDHYLKPQAEMAALFSDLPEACENTIEIARRCSFILNTRDP
ILPRFTGGAEDPEAAEKAEANELRRQALEGLEKRLAHVGLSEGHSREDYFTRLDYELGII
EGMKFPGYFLIVSDFIKWAKEHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFL
NPERVSMPDFDIDFCQDRREEVIHYVQQKYGRAQVAQIITFGSLQARAALRDVGRVLEMP
YGQVDRICKLVPNNPANPVTLAKAIEDEPKFQEAAEEEPIVGRLLTIAQKIEGLYRHAST
HAAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVD
FIARRGISVDLSTVPLGDPPTYEMLARGETVGVFQVESAGMRKALIGMAPDRIEDLIALV
ALYRPGPMENIPVYNARKHGEEEIESIHPVIDHLLAETQGVIIYQEQVMQVAQVLAGYSL
GEADLLRRAMGKKIKEQMDKQRVRFVEGAVERGVKKGRADEIFDLLAKFANYGFNKSHAA
AYAIVSYHTAYLKAHYPVEFLAASMTLDMANTEKLNDFRHDAKRLGIEVVAPSVQTSYRH
FEPGEARIYYALAAIKGVGEAAVDHIVAARGDRPFDSLEDFCQRIDPKQVNRRVLESLIC
AGAFDCFGKDRAALLAGLDRIIGFAQRTQDDLVSGQGDIFGSSGGVSAIVLPDYTPLPDS
ERLMREYQMLGYYQTAHPLDAYADLLSKMRVQSFADFSLSVKNGSDRGRLAGTVVGKQER
KTRTGNKMGIIAFSDSTGQFEAVLFSESLYQYRDLLEPGTSVVITVSAEMRPEGIGMRIQ
TVQSLEEEAVRQQKAMRIFLRNESPLASLARHLNDNGDGLVSFVVIQNDGLREVEVELPG
TYRLSPEVASAMRAVSGVIDVELV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggccggtatggatgcacgacgggatgaaactgcggacgcggacgcacgggcggtcagt
ttcgttcatcttcgcgtgcattccgcctattcgctcctcgaaggagcgctgccgctgaag
actgtgctgaagcgggctgtcgccgattgccagcccgctatcgcggtgaccgataccaac
aatctcttcggtgccctggagttcgcgcagaaggcggtcggcgagggattgcagccaatc
atcggctgccagctctccatcgacatggaggatggcagcgacggtgaacgccgcggcggc
tcgcatcttccggtcaagctgccgtcgatcgtgctgcttgtttccaatccagagggctat
gccaatcttctcgatcttgtcggtgaggcctatctcggcggcaatggaaatgacagcgtt
catatcaagagcagctggcttgagggacggaccgaagggctgatcgcgctcagcggcggg
ccgggcggccctatagatcagccgctagccctcggtttcgaagagaaggcgattgatcgg
ctatcgcggctgaaggcgcttttcggcgatcggctctatgtcgaggttcagcgccacggt
gaatacgacgtgcagcaggagcgccgcgttctgaagctcgcctatgatctcgatctgccg
ctcgttgccaccaatgaacccttctttcccgcgcgcgaggatttcgaggcgcatgatgcg
ctgatggcggttgcccacaatgcgatcgtgtcggatgaccgccggtttcgtcttacgccg
gatcattacctgaagccccaggcagagatggccgcactcttttccgaccttcccgaagcc
tgcgagaacacgatcgagattgcccggcgctgcagcttcatcctcaacacccgcgacccg
attctgccacggttcaccggcggcgccgaagatccggaagccgcggaaaaggcggaggcg
aacgagttgcgccggcaggcgctggaagggctcgagaaacggctcgctcatgtcggtctg
agcgaggggcacagccgggaggactatttcacccgcctcgactatgaactcggcatcatc
gaaggcatgaaattcccgggctactttctgatcgtttcggacttcatcaaatgggcgaag
gaacacgatatcccggtcgggcccggccgcggctccggtgcgggttcgctggtcgcctat
gcgctcacgattaccgacgtcgatccgctgcggttttcactgctgttcgaacgcttcctt
aaccccgaacgcgtgtcgatgcccgacttcgacatcgacttctgtcaggatcggcgtgaa
gaggtcatccactacgtccagcagaaatatggtcgcgcccaggtcgcgcagatcatcacc
ttcgggtcgctgcaggcacgcgcggcgctgcgcgatgtcggccgcgtgctggagatgcct
tacggccaggtcgatcgcatctgtaagttggtgccgaacaatccggcaaacccggtgacc
cttgccaaggccatcgaggacgagccgaaattccaggaagccgccgaggaagagccgatt
gtcggccggctgctgacgatcgcgcagaagatcgaggggctctaccgccatgcctcgacc
catgccgccgggatcgtcattggtgaccggccgctgtccaagctcgtgccgatgtatcgg
gacccgcgctcggacatgccggtgactcagttcaacatgaagtgggtcgagcaggcgggg
ctggtgaagttcgacttccttggcctgaagacgttgacggtgctgaagacggcggtcgat
ttcattgcccggcgcggtatttccgtcgacctttcgaccgtgccgctcggcgatccgccg
acctacgagatgctggcccgcggcgagacggtcggggtgttccaggtggaaagtgccggt
atgcgcaaggcactcatcggcatggcacccgaccgtatcgaggatctcatcgcgctggtg
gcgctttatcgtccgggtccgatggagaatattccggtctataatgcgcgcaagcatggc
gaggaggagatcgagtcgatccatcctgtgattgaccatctcctggccgagacccagggc
gtgatcatctatcaggagcaggtgatgcaggtcgcccaggtgctggccggctattcgctc
ggcgaagccgaccttctgcgccgcgccatgggcaagaagatcaaggagcagatggacaag
cagcgtgtccgcttcgtcgaaggcgctgtcgagcggggagtgaagaaggggcgggcggac
gagatcttcgacctgcttgcgaaattcgccaattacggtttcaacaagtcgcacgctgcg
gcttacgccatcgtctcttatcatacggcctatctgaaggcgcattacccggtcgagttc
ctggccgcgtcgatgacgctcgacatggccaataccgaaaagctcaacgacttccgtcat
gatgccaagcgcctcggcatcgaggtcgtcgcgccttcggtgcagaccagctatcgtcat
ttcgagccgggcgaggctcgcatctattatgcgctcgccgcaatcaagggtgtcggtgag
gccgcggtcgatcacatcgtcgccgcccgtggcgaccggcctttcgatagtctcgaggat
ttctgccagcgcatcgacccgaaacaggtgaaccggcgggtccttgaaagcctgatctgc
gccggcgccttcgattgcttcggcaaggaccgcgcggccctgctcgccggcctcgatcgg
atcatcggctttgcccagcgcacgcaggatgatctcgtcagcggtcagggcgatatcttc
ggcagcagcggcggtgtctcggccatcgttctgcccgactatacgccgctgcccgattcg
gaacggctgatgcgtgagtatcagatgctcggctattaccagacggcgcatccgctcgat
gcctatgcggaccttctgtcgaagatgcgggtgcagagctttgcggatttctcgctctcg
gtgaagaacggctccgatcgcggccgtcttgctggcacggtggttggcaagcaggagcgc
aagaccagaaccggcaacaagatgggcatcatcgccttttccgattcgaccggacagttc
gaggcggtgctgttttccgaatcgctctatcagtatcgcgatctcctggagcccggcacg
tcggttgtcatcaccgtatccgcggaaatgcggcccgagggtataggcatgcgcatccag
acggtgcagtcgcttgaggaggaagccgtgcgccagcagaaggcgatgcgaatcttcctg
cgcaacgaatcgccgctcgcctcgctcgcccgccatctcaatgacaatggcgacgggctc
gtctcctttgtcgtcatccagaacgatggcttgcgcgaagtcgaagtggaactgcccgga
acctatcgcctctctccggaagtggcgtcggccatgcgggcggtctcgggcgtcatcgac
gtcgagctggtctga
DBGET
integrated database retrieval system
