Martelella endophytica: TM49_19590
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Entry
TM49_19590 CDS
T03801
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mey03032
]
TM49_19590
03036 Chromosome and associated proteins [BR:
mey03036
]
TM49_19590
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_19590
DNA replication proteins [BR:
mey03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TM49_19590
Chromosome and associated proteins [BR:
mey03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TM49_19590
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TM49_19590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AJY47366
UniProt:
A0A0D5LTI0
LinkDB
All DBs
Position
complement(4231499..4231789)
Genome browser
AA seq
96 aa
AA seq
DB search
MIKSELVQIVAQRNPHLYHRDVENIVNAILDEIADALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDTVFVEEKWVPFFKTGKELRERLNPDQKD
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtcggaactggtccagattgtggcgcagcgcaatccgcatctatatcaccgc
gatgtcgagaacatcgttaacgcaatcctcgacgagattgccgatgcgctcgccgcaggc
aaccgggtggaactgcgcggcttcggcgcgttttccgtcaagaaccgaccttcgcggtcg
gggcgcaacccgcgcaccggagacactgtcttcgtcgaggagaagtgggtgccgttcttc
aagaccggcaaggaactgcgcgagcgcctcaaccccgatcagaaagactga
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