Martelella endophytica: TM49_20175
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Entry
TM49_20175 CDS
T03801
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mey
Martelella endophytica
Pathway
mey03420
Nucleotide excision repair
mey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TM49_20175
03430 Mismatch repair
TM49_20175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_20175
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM49_20175
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TM49_20175
MMR (mismatch excision repair)
Other MMR factors
TM49_20175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJY47461
UniProt:
A0A0D5LTS2
LinkDB
All DBs
Position
4336135..4338570
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AA seq
811 aa
AA seq
DB search
MNQGHDDIPFFDDDEPTPRQPAASAAGSIAARAMAARRAPEAPDYLIGLNPEQRDAVETT
EGPLLVLAGAGTGKTRVLTTRIAHILASGRAYPSQILAVTFTNKAAREMKERIGVLVGGA
VEGMPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVIRLIKQLIQAEELDDKRWPAR
QFASMIDGWKNKGLTPELIPEGDARAFANGRGRQLYQAYQDRLKTLNACDFGDLLLHPIR
LFRENPDVLKEYHRRFRYILVDEYQDTNTAQYMWLRLLAQRPAGETVNLCCVGDDDQSIY
GWRGAEVDNILRFEKDFAGAKVIRLERNYRSTAHILGAAGNLIAHNDGRLGKTLFTDRSD
PEDDKVQVHASWDSEEEARAIGEEIEQYQKKGEALNDMAILVRASFQMREFEDRFVTLGL
NYRVIGGPRFYERLEIRDAMTFFRLTCQPADDLALERIINTPKRGLGDQSVRKIHDYARS
RNIPMLAAAREMIDTDELKPKPRKALFDVVTQFTRWQELLETTPHTELAEQILDESGYTE
MWQNDRSAEAPGRLENLKELIRSMEGFESMRGFLEHVSLVMDADQNEDMDAVSIMTLHSA
KGLEFKTVFLPGWEEGLFPHQRALDESGRAGLEEERRLAYVGITRAKRNCHIWFVSNRRI
HGLWQSTMPSRFLDELPEAHVEVGETEVSYGGYGQSRFDRAEPFSNTYATPGWKRAQQNS
NDATRDNWGSRSGHAVERIGYGESGPRGRTIEGELVARSTEETPSRFSIGDRVFHMKFGN
GNIVEIEGNKLTIDFDKAGRKRVLDGFVQPV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagggccacgacgacattccgtttttcgacgacgacgaaccgacgccgcgccag
ccggcagcctcggccgccggctccattgctgcgcgtgccatggcggcccggcgggcgccg
gaagcgccggactatctgatcgggctgaaccccgaacagcgcgacgccgtggagacgacc
gaaggcccgctgctggtgctggcaggagccggaaccggcaagacgcgggtgctgaccacc
cgcattgcccatatcctcgcctccggtcgcgcctatccgagccagatcctcgccgtcacc
ttcaccaacaaggcagcgcgtgagatgaaggagcgcatcggcgtgcttgtcggcggcgcc
gtcgagggcatgccgtggctcggcaccttccactccatcggcgtgaagcttctgcgccgc
catgccgagcttgccggcctgaggtcggattttaccatcctcgacaccgacgacgtgatc
cgcctcatcaagcagctcatccaggccgaagagcttgatgacaagcgttggccggcgcgg
cagtttgcctcgatgatcgacggctggaagaacaaggggctgacgcccgagctgatcccg
gaaggcgacgcccgcgctttcgccaatggccgcggtcggcagctctatcaggcctatcag
gaccggctgaagacgctcaacgcctgcgatttcggcgacctgctgctgcatccgatccgg
ctgtttcgcgaaaatccggacgtgctcaaggaataccatcgccgcttccgctacattctg
gtggacgagtatcaggacaccaacaccgcgcagtacatgtggctgaggcttctcgcccag
cgtcccgccggcgagaccgtcaatctttgctgcgtcggcgacgacgaccagtctatctat
ggctggcgtggcgccgaggtcgacaacatcctgcgcttcgagaaggattttgccggcgcc
aaggtgatccggcttgagcgcaactaccgctcgacagcccatattttgggtgctgccggc
aacctgatcgcccataatgacggccgcctcggcaagacactgtttaccgaccgctccgac
cccgaagacgacaaggttcaggtccacgcctcctgggattccgaagaggaagcccgtgcg
atcggcgaggagatcgagcagtatcagaagaagggcgaagcgctgaacgacatggcgatc
ctcgtgcgtgcctctttccagatgcgcgaattcgaggaccggttcgtcaccctcggcctc
aattaccgcgtcatcggcggcccgcgcttttatgagcgcctggagatccgcgacgccatg
accttcttccggctcacctgccagccggccgacgacctggcgctggagcgcatcatcaac
accccgaaacgcgggctcggtgatcaaagcgtgcgcaagatccacgactatgcgcgctcc
cgcaacattccgatgctcgccgccgcccgcgagatgatcgacaccgacgagttgaagccg
aaaccgcgcaaggcgctgttcgacgtcgtgacccagttcacccgctggcaggaactgctg
gagaccacgccgcacaccgaacttgccgagcagatcctcgacgagagcggctataccgag
atgtggcagaacgaccgttctgccgaggcccccggccggctcgaaaacctcaaggagctg
atccgctccatggaggggttcgaaagcatgcgcggcttcctcgaacacgtctcgctggtc
atggatgccgaccagaacgaggacatggatgccgtctcgatcatgacgctgcattcggcc
aagggactggagttcaagaccgtgttcctgccgggctgggaggaaggcctcttcccgcat
cagcgggcacttgatgaatccggccgcgccgggctggaggaggaacgccgcctcgcctat
gtcggcatcacccgcgccaagcggaactgccacatctggttcgtctccaaccgccgcatt
cacgggctctggcaatcgaccatgccgtcgcgcttcctggatgaattgccggaggcgcat
gtcgaagtgggcgagacggaggtctcctatggaggctacggccagtcgcgcttcgatcgc
gccgagccgttttccaacacctatgccacgccgggctggaaacgggcccagcagaacagc
aacgacgccacccgcgacaactggggcagccgctccggccacgcggtcgagcgcatcggc
tatggcgagagcggaccgcgcggacgcacgatcgagggcgagcttgtggcgcgcagcacc
gaggaaacgccatcccgcttttccatcggcgaccgcgtcttccacatgaagttcggcaac
ggcaatatcgtggagatagagggcaacaagcttactatcgacttcgacaaggccgggcgg
aaaagagtcctcgacggcttcgtacagcctgtgtga
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