Methanobrevibacter sp. YE315: TL18_00360
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Entry
TL18_00360 CDS
T04279
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03030
DNA replication
meye03420
Nucleotide excision repair
meye03430
Mismatch repair
meye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL18_00360
03420 Nucleotide excision repair
TL18_00360
03430 Mismatch repair
TL18_00360
03440 Homologous recombination
TL18_00360
03460 Fanconi anemia pathway
TL18_00360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meye03000
]
TL18_00360
03032 DNA replication proteins [BR:
meye03032
]
TL18_00360
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_00360
Transcription factors [BR:
meye03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
TL18_00360
DNA replication proteins [BR:
meye03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
TL18_00360
DNA repair and recombination proteins [BR:
meye03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
TL18_00360
MMR (mismatch excision repair)
TL18_00360
DSBR (double strand breaks repair)
HR (homologous recombination)
TL18_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
OB_MEIOB_N
tRNA_anti_2
POT1PC
POT1
HROB
Zn_Ribbon_TF
A2L_zn_ribbon
Prok-RING_1
Zn_ribbon_6
DZR_2
DZR
Motif
Other DBs
NCBI-ProteinID:
AMD18405
LinkDB
All DBs
Position
84272..86662
Genome browser
AA seq
796 aa
AA seq
DB search
MTEEIQEKYDKVKDLITEEEFLSRMNDFKSQEVDNPFMNASGFADMVVGELITEEVEVVS
EKPEYAVDTIDKLEEGSKDVTISGRVISISNPRSFKTRKGQNGEVCNVELKDNTGEIRAV
FWTQNIKLLKNIKEGNIIQIKNVDIKDGFSGLEANLRPRSTVKQLAEDPSKFPEYEETIT
DIADIKPDTKVNVIARIVRIPTIRSYEKNGKEGKVASIELQDASGKISYTLWNKNVELID
SLKLEDGDTVKIIQAQARERIDRDGNSEISLTHWDGRIIKGDFDVPEVEQEFTPIADLSE
QKDVSIIGIVSRLQDVRTFTRKTDGNEGKLRNFDVRDVTGEIRVTLWGDDTDLPIKKGDI
VKIIGGDVRYDEYTQSQYSMNTNFNTQITINPENLPIEELDELESLKNELRPTPIGEIYT
IDDDGIEIDVVGRILSVEDINEFQRDDGSVGIVRSVLFADESGKVRLALWNERAQEDYKV
GDAYQIENARTRLGMYSVDLNIGTTSRVIKLSEEQASARFIPELSTLEKTLYDYKKISDL
DEDDQDVIVIGRIIELYEVRKFDRDNGDEGFVRNMEVADDTGSLKVVLWDDDAKKEFEVG
QPIKLQNPRLSLDMDNRIEANVNRSTAILEPSESELEKLPSQEELMEAIYVSKPIEALTE
DDTNVCVTGTIKEVFTQRTILKKCPNCRANVEETDDEYICDNCGNVFDEPDYILMIPTRI
EDDTGEIQVTFFDNLAEELIGMKKEEIVSLVEDGYSIEDKIEDLNGQTIEIIANVSFDEY
NEENRLNPKKILSKYF
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagagatacaggaaaagtatgataaggttaaggacttaatcaccgaagaggaa
ttcctttccagaatgaacgattttaaaagtcaggaagtggataatcctttcatgaatgct
tccggatttgctgacatggtagtcggcgaattgataactgaagaagttgaagtggtttca
gaaaaaccggaatatgcagttgacactatcgacaaacttgaagaaggaagcaaagatgtt
accatttccggtagagtaatttcaatttcaaatccaagatcatttaaaactcgaaaaggg
caaaacggtgaagtttgcaatgtcgagttaaaagacaacaccggtgaaattagagctgta
ttctggactcaaaacattaaacttcttaaaaatatcaaagaaggaaacattattcaaatc
aaaaatgtcgatatcaaagacggattttccggattagaggcaaatttaagacctagatca
actgttaaacagttagctgaagatccttctaaattccctgaatatgaagagacaattaca
gacattgctgatatcaaaccggacactaaagtgaatgttattgcaagaattgttagaatt
ccaactatcagaagctatgaaaagaatggaaaagaaggaaaagttgcttcaatagaattg
caagacgcttccggaaaaatctcatacaccttatggaataaaaatgttgaattgattgac
agtttaaaattagaagacggagatacagtcaaaataattcaagcccaagcccgtgaaaga
attgacagagatggaaatagcgaaatttccttaactcattgggatggtagaattattaaa
ggcgattttgatgttcctgaagttgaacaggagtttaccccaatcgccgatttaagtgag
caaaaggatgtttcaattataggtattgtttcaagactccaggatgttagaacatttacc
agaaaaactgatggcaatgaaggaaaattaaggaattttgatgtaagggatgtaaccggc
gaaattagggttacactctggggtgatgatacagatctgccaataaagaaaggagacatt
gtaaaaattatcggcggtgatgtaagatatgatgagtacacccaaagccaatattcaatg
aatactaattttaatactcaaatcactattaacccggaaaatctaccaattgaagagctt
gatgaattggagtcattaaaaaatgaattaagaccaacccctattggcgagatttataca
attgatgatgatggtatagagattgatgttgtaggtagaattctatcagttgaggatatt
aacgagttccaaagagatgacggctccgttggtatagtccgttcagtcctctttgctgac
gaatcaggcaaagttagattggctttatggaatgaacgtgcacaggaagattataaagtt
ggagacgcatatcaaatcgaaaatgcaagaaccagacttggaatgtacagtgtagattta
aacatcggaactacttcccgtgtaattaaattatccgaagaacaagcatccgctaggttc
atacctgaattatccactttagagaaaacattatatgattataagaagatttctgacctt
gatgaagatgatcaagatgttatcgtcattggtagaatcattgaattatatgaagtccgt
aaattcgatagggataatggggatgaaggttttgttagaaatatggaagttgctgacgat
acaggttctcttaaagttgtcctttgggacgacgatgctaaaaaggaatttgaagtaggt
cagccaattaaattacaaaatcctcgcttatctttagatatggataatcgtatagaagca
aatgtaaatagaagtacagctattcttgaacctagtgaaagcgaattggagaaattacct
tcccaagaagaattaatggaagcgatctatgtttcaaaacctattgaagctttaactgaa
gatgacacaaatgtttgtgtaactggtaccattaaagaagtttttactcaaagaactatt
cttaaaaaatgtccaaactgcagagctaatgttgaagaaactgatgacgaatatatttgt
gataattgtggtaatgtatttgatgagcctgattacattcttatgattccaaccaggatt
gaagatgataccggtgaaattcaagttacattctttgataatttagccgaagaattaatc
ggaatgaaaaaagaggaaattgttagccttgttgaagatggttattcaattgaagataag
attgaagatttgaatggacaaaccattgaaataattgctaatgttagttttgatgaatat
aatgaagaaaataggttaaatcctaagaaaattttatctaaatatttttaa
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