Methanobrevibacter sp. YE315: TL18_00670
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Entry
TL18_00670 CDS
T04279
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TL18_00670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_00670
Enzymes [BR:
meye01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TL18_00670
DNA repair and recombination proteins [BR:
meye03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TL18_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMD16679
UniProt:
A0A125RAD9
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All DBs
Position
147151..148053
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AA seq
300 aa
AA seq
DB search
MIIKSPIDLDLTINSGQTSQPPWIQNGDSFSNVVVTDGKPLIFNVRQSGDYLVFNLDDKR
ALSRLNYIFDLDFDLDKFYSYLNDHEELRDMSGFCRGLRLFLAPDPFECVISSICSANNS
IKRWTKSVSEIKKNWGVRYGDYYTFPKSNVMSNIYLDEEDEFNLSDVQDICDCSNNLKNC
GVGYRAPYMRRASELFTDEIDLCEIFEMSYDEAFETMLEVPGVGPKVADCILLYGFNFRE
AFPSDVWIKRIVSHLYFDGRDISVAKVRDFGMEEFGEYAGYVQLYMFHYARKSGLMAKLK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgataattaaatctccgattgacctggatttgacaataaattcaggccagacttcacaa
cccccatggatacaaaacggcgattcattttcaaatgtcgttgtgacagacggcaaacct
ttaattttcaacgtcaggcagtcaggggattatttggttttcaacttggatgacaagagg
gccctttccaggctgaactacatttttgatttggattttgatttggacaagttctacagc
tatctaaacgatcatgaagagcttagggacatgtccggattctgcaggggcttgagactg
tttttggcgccagaccccttcgagtgcgtaatctcgtcaatatgctctgcaaacaattca
attaaaagatggacaaaatccgtttctgaaatcaagaagaattggggagtaagatatggc
gattactatacgtttcctaaaagcaacgtcatgtcaaacatatacttggatgaagaggat
gaatttaatctatcggatgttcaagatatttgcgattgcagcaataatcttaaaaattgc
ggcgtaggatatagagcaccatacatgagaagggcaagcgagctttttacagatgaaatt
gacctttgcgaaatatttgaaatgagctatgatgaagcctttgaaacaatgcttgaagtt
ccgggagtaggccctaaagttgccgactgcattttgctttacgggttcaacttcagggag
gcctttccaagcgatgtttggataaaaaggatagtatctcatttatattttgacggcagg
gacatcagtgttgccaaagtccgtgactttggaatggaagagttcggagaatatgcaggc
tatgtgcagctctatatgtttcattatgcgcgcaagtcaggtctgatggcgaaattgaaa
tag
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