KEGG   Methanobrevibacter sp. YE315: TL18_01055
Entry
TL18_01055        CDS       T04279                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
meye  Methanobrevibacter sp. YE315
Pathway
meye03030  DNA replication
meye03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:meye00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TL18_01055
   03410 Base excision repair
    TL18_01055
   03450 Non-homologous end-joining
    TL18_01055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:meye03032]
    TL18_01055
   03400 DNA repair and recombination proteins [BR:meye03400]
    TL18_01055
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:meye04147]
    TL18_01055
DNA replication proteins [BR:meye03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TL18_01055
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TL18_01055
DNA repair and recombination proteins [BR:meye03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TL18_01055
Exosome [BR:meye04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TL18_01055
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2 DUF6665
Other DBs
NCBI-ProteinID: AMD16750
UniProt: A0A125RAL0
LinkDB
Position
complement(233649..234632)
AA seq 327 aa
MGVKLKDIIEPKSISFKDLEGRTVSIDAFNTLYQFLSTIRQRDGRPLTDENGNITSHLSG
ILYRNSSMIEKDIKPIYIFDGKAPELKSETQAKRREVRDEAEKIYKDALASGDTEKARKF
AMRSSKLSPEIIESSKKLLTLMGIPYVDAKGEGEAQAAYLVSKGDAYAVASQDYDCLLFG
AKRVVRNLAVNSNLGNLEYYELDRVLRELKITREELIDMGILIGTDFCEGLKGVGAKTAL
KLAHKGQLKEKIAELQKESTHDLDEVREIFLNHNVNTDYKIKWEKPKQDKIIEFLCYEHG
FSEDRVIKASDKLKNLSSSQGSLDAWF
NT seq 984 nt   +upstreamnt  +downstreamnt
atgggtgtgaaattaaaggatataattgaacctaaatctatcagctttaaagatttggaa
ggaagaactgtatctatagatgcatttaacactctataccagttcctatccacaatcaga
caaagggacggcaggcccttaaccgacgaaaacggcaacattacttctcacttaagcgga
atattatacagaaactcttcaatgattgaaaaggacattaagccaatttatatttttgac
ggaaaagcacccgaactcaaaagcgaaacccaggctaaaagaagagaagtcagggatgaa
gcggaaaaaatctataaggatgcacttgcctctggagatactgaaaaagcaagaaaattc
gcaatgcgatccagcaaactatcacctgagataattgaatcttctaaaaaactattaaca
ttgatgggaattccttatgttgatgctaaaggggaaggtgaagctcaagcagcatatctg
gtatcaaaaggagatgcatatgctgtggcatcacaagattacgattgcctattatttgga
gccaaaagggttgtcagaaacctggcagtgaattccaatcttggaaatcttgaatactat
gaactggacagggttttaagagaattaaagataacaagagaagaactgattgacatggga
atattaattggaaccgatttttgtgaaggtttaaaaggtgtaggtgcaaaaaccgcactt
aaactagcgcataaaggccaattaaaagaaaaaatcgccgagcttcaaaaggaatcaacc
catgatttggatgaagtaagagagattttcctaaaccacaacgtaaatacagactataaa
attaaatgggaaaaaccaaagcaagacaaaataattgaatttttatgctatgagcacgga
ttttccgaagaccgtgtaatcaaagcatcagataaacttaaaaatttaagttcaagtcag
ggaagccttgacgcatggttttaa

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