Methanobrevibacter sp. YE315: TL18_01405
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Entry
TL18_01405 CDS
T04279
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03030
DNA replication
meye03430
Mismatch repair
meye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TL18_01405
03430 Mismatch repair
TL18_01405
03440 Homologous recombination
TL18_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meye03032
]
TL18_01405
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_01405
Enzymes [BR:
meye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TL18_01405
DNA replication proteins [BR:
meye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TL18_01405
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TL18_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMD16814
UniProt:
A0A125RAS4
LinkDB
All DBs
Position
341416..342072
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AA seq
218 aa
AA seq
DB search
MKVIFFDTETSGLNCRDCEIIELAMLTVEDGVITECYDEFVNIGKAIHPRITQITSITND
MLKNEGLDEKRVAEDIADRLTPGTLMIAHNCQFDLSFVFSLLQRHFPDDAFDIVKNVYWL
DTLTVLKDRKKYPHKLIDAVEYYGVEPVNFHRAIGDTKALRNVTIALRNERDDLVEYINI
FGFNPKYGVEGVRFPFIEYKKQYFNNRIVNPSDILPRK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgatattttttgatactgaaacttccggattgaactgtagggactgtgaaatc
attgaacttgccatgcttacggttgaagacggcgttataactgaatgttatgatgagttt
gtaaatatcggaaaggcaattcatccaagaatcacccaaatcaccagcattacaaacgac
atgttgaaaaatgagggattggatgaaaaaagggttgcagaggatattgcagacagatta
actccaggaacattgatgattgctcataactgtcaattcgatttgtcatttgtcttcagt
ctgctgcaaagacattttcccgatgacgcttttgacattgtaaaaaatgtttattggctg
gatacattgactgtacttaaagacagaaagaagtatcctcataagctaatagatgctgta
gaatattacggtgttgaaccagttaattttcacagggctattggcgatacaaaagcactg
cgcaatgtgacaatagccttaaggaatgaacgtgatgatctggttgaatatattaatata
tttggttttaaccccaaatatggtgttgaaggggtaagattcccatttatagagtataaa
aaacagtattttaataataggatagtcaatccgagtgatattcttccaagaaagtaa
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