Methanobrevibacter sp. YE315: TL18_02205
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Entry
TL18_02205 CDS
T04279
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TL18_02205 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meye03021
]
TL18_02205 (tfb)
Transcription machinery [BR:
meye03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TL18_02205 (tfb)
Prokaryotic type
Archaeal type
TFB
TL18_02205 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Lar_restr_allev
RPA_interact_C
zf-Mss51
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AMD16937
UniProt:
A0A125RB47
LinkDB
All DBs
Position
498171..499091
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AA seq
306 aa
AA seq
DB search
MFIDDDVEPCPVCNSTERKIDNGRAEVTCADCGLVLEENLIDCGPEWRAFDHEQRDKRTR
VGAPTTNTIHDRGLSTIIDWRNKDIYGREIPSGSRAQWHRLRKWQRRIRISGAGERNLAF
ALSEIDRFSSRLSLPRSVREDASMIYRGAVDKKLIRGRSIEGVAASSLYAACRRCKVPRT
LDEIAEASDVTKKEVGRTYRFLARELKIKLPPTSPTDYIPRFATKLGISGEAESKAIEII
EEAMKNDLTSGRGPTGVAAAALYISSVLFGERKTQKEVATIAGVTEVTIRNRYKELTEKV
DVGVCI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atcttcatcgatgatgatgttgaaccttgtccagtttgcaattcaactgaacgtaaaatt
gacaatggaagggcggaagtaacttgtgcagattgtggtttagttttagaagaaaactta
attgattgcggtcctgaatggagggcttttgaccatgaacaaagagacaagcgtacaaga
gtaggggctccaactacaaataccattcacgataggggtttatccaccattattgattgg
agaaacaaggatatctatggtagagaaattccatcaggaagcagagctcaatggcacaga
ttaaggaaatggcaaaggagaattagaatttctggagccggcgagagaaacttggcattt
gcattaagtgaaatcgatagattctcttcaagattaagccttccaagaagtgtaagggaa
gatgcttcaatgatttacagaggtgctgtagacaagaaactaataaggggaagaagtatt
gaaggtgttgccgcttcatcactttacgccgcttgcagacgatgcaaagttccccgaact
ttagatgaaattgccgaagcgtcagatgtaacaaaaaaggaagtcggtcgaacatacaga
tttttggctcgtgagttgaaaattaagttgcctccaacttctccaacagattatattcct
agatttgctacaaaattaggaatatccggtgaagcagaatctaaggctatcgaaataatt
gaagaagcgatgaaaaatgatttgacttctggaagagggcctactggtgtggccgccgca
gcattatatatttcatcagtgttgtttggtgagagaaaaactcaaaaagaagtcgcaacc
attgccggcgttacagaggttactatacgtaatagatataaggaattaactgaaaaagtg
gatgtaggtgtttgcatttaa
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