Methanobrevibacter sp. YE315: TL18_02240
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Entry
TL18_02240 CDS
T04279
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TL18_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_02240
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TL18_02240
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
AAA_14
AAA_21
Ribosomal_S13
AAA_28
ABC_tran
AAA_29
DUSP
Motif
Other DBs
NCBI-ProteinID:
AMD16944
UniProt:
A0A125RB54
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Position
complement(509432..511357)
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AA seq
641 aa
AA seq
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MQREKITLQNIKGIGDKISEKIISSVGGEEELQKIVDDVDVERIANIEGISQRKAIEIMN
QLLNNPKYEFIKSDRAMEIYEDIINKILSYSNTSYSKNRILLLSPSKDIEKINSQLDFVM
NAKEHVSQLPIIKLRGLMKNLKEVEEAKPEYDPSKAILVESDEDASYLMDLGLNQYYPII
TASDSPLLQEEIMNYDLVFYVYSQGILDFEGMPNLVMINIEENDYEIVPEKIIDFFIQNK
ELFSRVHEIQKIRNKESVLGDIIPIINELNIIDKREVDIEKLVYSLKDDMDNELEKSIKQ
VDLEGDEILNLLNNNFPPKISKIFDEIINKRKEIIREKTGLSFDPFLRTYPIQIDDSEIE
RITLEQSSKKENDIFDIKKSAAIELNSIKQKAIDEVKDTIKFDYEFSLGSFAYEYGLCRP
EFSDEIKLNGALHLELALKKDKDYIQKVDYQLTKNENVALLTGANSGGKTTLLETLTQIS
IMAQMGLPVSADSAKIKLLDEIYHFSKKRSLDAGAFESFLNVFIPIVTTNSEKLVLLDEL
EGITELDAAVKIISTFIDMIKESNSYGVIVTHMARELMNYTDIRVDGIEAKGLDENYNLI
VDRTPKMNFLAKSTPELILKRIYEKSDDDLKVVYARILEKF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagggaaaaaattacattgcaaaacattaagggaattggagataagatttctgaa
aaaataatcagcagcgttggtggtgaggaagaactccaaaaaatcgttgatgatgtggat
gttgaaagaatagcgaatatcgaaggcataagccagagaaaagccattgaaatcatgaat
caactattaaacaatccaaaatacgagtttataaaaagcgacagggcaatggagatttat
gaagacatcattaacaaaatattatcctattccaacacttcttattcaaaaaataggatc
ctgctgctttcaccttcaaaggatattgaaaaaatcaactcacaacttgattttgtaatg
aatgcaaaggaacacgtttcacaacttccaattataaaattaagagggttgatgaaaaac
ttaaaagaggttgaagaagcaaaacctgaatacgacccgagcaaagctattttagttgaa
agtgatgaggatgcttcttatttaatggatttaggattaaaccaatattatccaatcatt
acagcaagcgattcaccattacttcaagaagaaataatgaattatgatttagtattttac
gtatactcccagggaatacttgattttgaaggaatgccaaacctggtgatgattaatatt
gaagaaaatgactatgagatagttccggaaaaaataatcgacttttttatacaaaacaaa
gagttattttcaagggttcatgagattcaaaagattagaaataaagaaagtgtccttgga
gacataatccccatcattaatgagttaaatatcattgataaaagggaagtggatattgaa
aaacttgtttattctcttaaagatgatatggataatgaattagaaaaatcaatcaaacaa
gtcgaccttgaaggagatgaaattcttaacttattaaataacaatttcccgccaaaaatt
agcaaaatatttgatgaaattatcaataaaaggaaagaaataatccgtgaaaaaactggg
ttaagctttgacccatttttaagaacataccctatccaaatcgatgattcagaaatcgaa
agaataacccttgaacagtcatctaaaaaagaaaatgacatatttgatattaaaaagagt
gctgcaatagaattgaattcaatcaagcaaaaggcaattgatgaagtcaaagatacaatc
aaatttgattatgaatttagtttaggaagttttgcatatgaatacgggttatgcagacct
gaattcagtgatgaaatcaaactaaatggagcactgcatttagaacttgcacttaaaaaa
gacaaagattacattcaaaaagttgattaccaactgaccaaaaacgaaaacgttgcacta
ttaacaggagcaaacagcggagggaaaacaacactccttgaaacactaacccagatatca
attatggcacagatggggcttccagtaagtgcagacagtgcaaaaataaaactgttagat
gaaatttaccacttctctaaaaaaaggtctttagatgcaggagcatttgaatccttctta
aatgtgttcataccaatcgtcaccacaaacagcgaaaaattagtgcttttggacgaactt
gaaggaataaccgaacttgatgctgcagtcaaaatcatatccacattcatagatatgatt
aaagaatccaattcctacggagtaatcgttacacatatggcaagggaactgatgaactac
acagatattcgagtagatggaatagaagctaaaggattggatgaaaattacaatttgatt
gttgatagaacaccaaaaatgaatttccttgcaaaaagtactcctgaattaattttaaaa
agaatttatgaaaaatcagatgatgacttaaaagtagtatatgcaagaatcctggaaaaa
ttctaa
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