Methanobrevibacter sp. YE315: TL18_02755
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Entry
TL18_02755 CDS
T04279
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TL18_02755 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meye03021
]
TL18_02755 (tfb)
Transcription machinery [BR:
meye03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TL18_02755 (tfb)
Prokaryotic type
Archaeal type
TFB
TL18_02755 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Sigma70_r4
UPF0181
Cyclin_C
Cas_Cas5d
HTH_Tnp_ISL3
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-ProteinID:
AMD17037
LinkDB
All DBs
Position
620830..621624
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AA seq
264 aa
AA seq
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MGPEWRAFDHEQRDKRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLR
KWQRKIRISGATERNLAFALSELDRDSSRLGLPRSVREAASVVYRSAVDNKLIRGRSIEG
VVAASLYAACRRCNVPRTLDEIAEVSRVTKKEVGRTYRFLTRELNIKLPPTSPVDYVPRF
ASELGLSGEAQSKAIEIIEKAMEKGLTSGRGPTGVAAAALYIASVLLGERKTQRDVADIA
GVTEVTIRNRYKELTEQLEMGVTL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctgaatggagagctttcgaccacgaacaaagagataagcgtacaagagtaggt
gctccaatcacatacactattcacgataaaggtttaagtaccatgatcgattggagaaac
aaggatatttacggtcgtgatattcctgcaagaaacagagctcaatggtacagattaaga
aaatggcaaagaaaaatcagaatttccggtgcaaccgaaagaaacttggcgtttgcatta
agtgaacttgaccgtgactcctcaaggttaggtcttccaagaagcgtaagggaagctgca
tccgtagtgtatagaagtgcagtagataacaaattgattagaggaagaagtattgaagga
gtagttgcagcatcattatacgctgcatgcagacgttgtaatgtaccacgtactttagac
gaaattgcggaagtatcaagagttactaaaaaagaagtgggccgtacatacagattcctg
acccgtgagttaaacattaaattgccaccaacttctccggtggactatgttcctagattt
gcttcagaactgggattatccggtgaagcacaatccaaagctattgaaatcattgaaaag
gcaatggaaaaaggattaacctctggaagaggacctactggtgtagcagcggctgcattg
tacatcgcatcagttttactcggtgagagaaaaacacaaagggatgtagcagatattgct
ggcgttactgaagtaaccataagaaacagatacaaagaattaactgaacaattagaaatg
ggtgtaactttatag
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