Methanobrevibacter sp. YE315: TL18_03880
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Entry
TL18_03880 CDS
T04279
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
meye
Methanobrevibacter sp. YE315
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_03880
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TL18_03880
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Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
AAA_22
SLFN-g3_helicase
CbiA
T2SSE
AAA_30
TrwB_AAD_bind
AAA
nSTAND3
AAA_19
Methyltransf_31
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AMD17237
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Position
895105..896712
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AA seq
535 aa
AA seq
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MYAEDKILIGCNENENVFLLPKMANRHGIIAGATGTGKTVTLKVLAESFSDLGVPVFLAD
MKGDISGLVKVGSTNDFIAKNVEAFGLEEKGFNFHEYPVEFWDLFGEKGIPVRVTLSEMG
PVLLSKILNLSEAQAGVLNIVFRVADDESLLIIDLKDLKAMINHVVENKDQYESQYGAIA
PKSASTILRSLIAFEDQGGNLFFGEPALDLDDFMQVDDNGKGVINVLDAQKLSLSPEIYS
TFLLWMMSSLYQNLPEVGDMDKPKFVFFFDEAHLLFDEISPEFAKKIEQIVRLIRSKGVG
LYFISQSPADIPDDILAQLGNRIQHALRAYTPKDQKAVKVAAETFRPNPNFDTAEVISNL
GTGEALVSTLDEKGAPNVVEQVKIVPPQSHIGAIDDDLRQQIIDISEFKSKYWEALDSES
AYELLLNKIDSNPNIESEVPEVDKQIIEEVKTQKQEAPEPVEEAPESAEEAPAQQGSILG
DILGTVIAGQTQTKGKRTKKSAQQKMVEKAATQAVNTAAREVTKGIMRGIFGQMK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagaagataagatattaattggttgtaatgaaaacgaaaatgtgtttttatta
cccaaaatggctaataggcatggtataattgctggagcaacaggtacaggtaaaacagtt
accttaaaagtattggctgaatctttttcagatttgggagttccagtatttttagcggat
atgaaaggggacatttcaggtcttgtaaaggtaggttcaacaaacgacttcattgcaaag
aatgttgaagcgtttggccttgaagagaaaggatttaatttccatgaatatcctgttgaa
ttttgggatttgttcggagaaaaaggaatccctgttagagtgacactatctgaaatgggt
cctgttttactttcaaaaatattaaatttatccgaagcgcaagcaggtgttttaaatata
gtattcagggttgctgatgatgaatcccttttaataattgatttgaaagatttaaaagca
atgattaatcatgtcgttgaaaacaaggaccagtatgaaagccaatatggtgcaattgct
ccaaaatcagcaagtacaattttaagaagcctgattgcctttgaagaccaaggcggaaat
ctgttctttggtgaacctgcacttgatttagatgatttcatgcaagtcgatgataatgga
aaaggtgttatcaatgttttggatgctcaaaaattatcattatcacctgaaatatattca
acattcctgctttggatgatgtccagcctatatcaaaacttgcctgaagtaggggacatg
gacaaacctaaattcgtattcttctttgatgaagcacatttgttgtttgatgaaatctca
cctgaatttgcaaaaaaaatcgagcaaatagtaaggcttatcaggtcaaaaggagtggga
ttatactttatttcacaatctcctgcagacattcctgatgacattttggcacagcttgga
aaccgtatccagcatgcacttcgcgcatacactccaaaagatcaaaaggctgtaaaggtt
gcagctgaaactttcagaccaaaccctaattttgatactgctgaggtcatttccaatttg
ggaaccggtgaagcattggtttctactcttgatgaaaaaggtgctccaaatgttgttgaa
caagtcaaaatagttcctcctcaaagtcacattggagctattgatgatgatttgcgccag
caaattattgacatatccgaattcaaatccaaatattgggaagctttagacagtgaatca
gcttatgaactgttactgaacaaaatagattcaaatccaaatattgaaagtgaagttcca
gaagtcgataaacagataattgaagaggtcaaaacccaaaaacaagaggcacctgaacct
gtagaagaagcgcctgaatcagctgaggaagctcctgcacagcaaggttccattttagga
gatattctaggaactgttattgcaggccaaactcaaaccaagggtaaaagaaccaaaaaa
tccgctcagcaaaaaatggttgaaaaggcagctacacaggccgtcaatactgcagcccgt
gaagttacaaaaggaatcatgaggggcatattcggtcagatgaagtag
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