Methanobrevibacter sp. YE315: TL18_05595
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Entry
TL18_05595 CDS
T04279
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03420
Nucleotide excision repair
meye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TL18_05595
03430 Mismatch repair
TL18_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_05595
Enzymes [BR:
meye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TL18_05595
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL18_05595
MMR (mismatch excision repair)
Other MMR factors
TL18_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
DEAD
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMD17539
UniProt:
A0A125RCU9
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All DBs
Position
1277985..1280429
Genome browser
AA seq
814 aa
AA seq
DB search
MISYEEFEDVVVNILKRDISSNQDQKKAILSPPNKSLFIVAGPGSGKTTVMVLKILKYIF
VDDVNPNEILATTFTRKAADELYSRILGWGDEIKNYLIDNMDDDNFENILKIDRIDFNQI
NIGTTDSIAEELLRDYKKPGENQAIVIEEFVANSAMIKILIDGEKYLNKELVEYLKELSG
KEKIEEPSKLSEILIEIKNRIYYDQVDFNELYEKTQKGSGARLALECIKEYETTLKNRNT
IDFAMLESKFLKKLKNGDLKTFMDEIKIVLIDEYQDTNLIQEDIYFTIAKSALENDGNIT
VVGDDDQSLYRFRGATVDLFTNYQKRIKERLGIDVEEINLRTNYRSTENIIEHCNQFAEL
DKEYQNARVENKPKIIAPDFEKDKMPILGMFRNNPEMLAVDLAKLINKLVNKGECQLKVL
EVLDKEYYEKVNGEISIARLQQIKSQKIREGKEVKKITLKLDSDYGSASDIAILSYSPKE
LQYGKRSFLYFLRRNLKRFNNPIEMFNPRGIDLQDIDVVGVFCGLILECIDPESSFQNSD
KTIPNLAKRNMRRWRVKAQEYIKLNPEPREPITLSQFVTSWQIRRPRGYDEWPKSASLME
LAYKITTWIEELQDDVEGIVYLEAITKSITQTGFFNDYHSNISFRSPKQERDSVLEAIWN
IFIPLSTGGVSIDESLLETLPDDRVNVLSIHQSKGLEFPLVVVDVGSRFKTNNIKTQRLR
FPKTLKDEATIEDTIRQYSSIGKNDRSEKDRSFDDLTRLYFVAFSRAESVLLLVGLNSAI
EGYTNKNNHYDIPNVALGWSRDEEYVGFNEIYLI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatatgaggaatttgaagatgttgtcgtgaatatattaaaaagagacatctct
tcaaatcaggaccagaaaaaagcaatattatcaccacccaacaaatcccttttcattgta
gccggtccaggatctggaaaaacaacagtaatggttcttaaaatactcaaatacattttt
gtcgatgacgttaatcctaatgagatattggccacaacatttacaagaaaagctgccgat
gaactatactccagaatactcggttggggagatgagattaaaaattatctaatagataac
atggatgatgataactttgaaaatatcctaaaaatagataggattgattttaaccagata
aacatcggtacaacagacagcatagccgaagaattacttagagactataaaaaacctggg
gaaaatcaggcaattgttattgaagagtttgttgcaaactctgcaatgataaaaatcctt
attgatggtgaaaaataccttaacaaggagctggttgaatacctgaaggaactaagcgga
aaggaaaaaattgaagaaccctctaaactaagcgaaattctcattgaaattaaaaataga
atctattatgaccaagtagacttcaatgaattgtatgaaaaaacacagaagggaagcggc
gctcgccttgcacttgaatgcataaaagaatatgaaacaacccttaaaaatagaaataca
attgattttgcaatgcttgaatcaaagttcctcaaaaaactaaaaaacggcgatttaaaa
acctttatggatgaaataaagattgtattgattgatgaatatcaggataccaatctgatt
caggaggacatctactttacaatagcaaaatcagcgcttgaaaatgatggaaacataacc
gttgtaggtgacgatgaccagtccctttaccggtttaggggagcgacagtagatctgttt
acaaattatcaaaaacgtatcaaagaaaggttaggcattgatgttgaagaaatcaactta
agaacaaactaccgttcaacagaaaacattattgaacactgcaatcagtttgcagaactt
gacaaggaatatcaaaacgcaagagtggaaaacaagccaaaaattattgctcctgatttt
gaaaaggataaaatgcctattttaggaatgttcaggaataaccctgaaatgcttgcagtg
gatttggctaaattaataaataaattggtgaataaaggagaatgccaattaaaagtttta
gaagttctggacaaggaatattatgaaaaagtgaatggcgaaatcagcattgcaagattg
cagcaaataaaaagtcaaaaaataagagaaggaaaagaagtcaagaagataacactcaaa
ttggatagcgactacggttccgcttcagatattgcaatcctttcatactcaccaaaagag
ctccaatacggaaagcgttcattcttatactttttaagaagaaatctcaaacgatttaat
aatccaattgaaatgttcaatccaagaggaattgaccttcaagacattgatgttgtagga
gtgttctgcggtttaattctagaatgcatagaccccgaatccagcttccaaaattcagat
aagacaattccaaacctggccaagagaaacatgagacgctggagagtgaaagcccaagaa
tatataaaactaaatcctgagccaagagaacctattacattatcacaattcgttacatca
tggcagattagaaggccaaggggatatgatgaatggccaaaatcagcgagtcttatggaa
cttgcatataaaataacaacttggattgaagaattgcaggatgatgttgaaggaatcgta
tatctggaggcaattaccaaatcaattactcaaaccggatttttcaatgattaccattca
aatatctcatttagaagtccgaaacaggaaagagattccgtgcttgaggccatctggaat
attttcatcccattatcaaccggaggagtcagcattgatgaatcactgcttgaaactctg
cctgatgatagggtgaatgttttatcaatccaccaatccaagggattggagttcccattg
gtcgttgttgatgtaggctccaggtttaaaaccaataatatcaagactcaaagattgaga
tttcctaaaaccctcaaggatgaagctaccattgaagacactataagacaatacagctca
attggtaaaaatgacagaagtgaaaaggacagatcttttgatgacttaacaagactgtat
tttgttgcattttcaagagctgaaagtgttttgttattggttggccttaactcagctatt
gaaggttataccaataaaaacaatcattatgatataccgaatgtcgctcttggatggagc
agggatgaagaatatgttggatttaatgagatttatcttatatag
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