Methanobrevibacter sp. YE315: TL18_05630
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Entry
TL18_05630 CDS
T04279
Name
(GenBank) recombinase RecF
KO
K03546
DNA repair protein SbcC/Rad50
Organism
meye
Methanobrevibacter sp. YE315
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_05630
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TL18_05630
Archaeal homologous recombinant proteins
TL18_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_29
Rad50_zn_hook
AAA_15
SbcC_Walker_B
AAA_21
BLOC1_2
Nuf2_DHR10-like
ABC_tran
DUF2730
ABC_ATPase
Styelin
AAA_22
MukB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMD17546
UniProt:
A0A125RCV6
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Position
complement(1286124..1288871)
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AA seq
915 aa
AA seq
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MIFTKLKLINFKSHENTIIKFDKGISVIVGENGAGKSTILEGISFALFKQHTGKKIDDLV
RNNAQSMLVELGFTSNGRQYKIIREKKSNLTSSIYKKTSADGDYVHICSGDKEVANEIRQ
ILDIDSDLFLNAIYIRQGEISELVDKTPAEKKKLIGKLLGIDSLEKAWNNLLPLITDYEN
ELSELKGKLYNSDELKENLEKKKDELNSLKERGHELEKNIEEVNELRDEISESKRNMERE
KEIYEAQSNNLISEEKTLSKLENDKRTVQDDLDKINNAEEEIERLEKYVSKLDTYLDFEK
SVTSIQNLKEKEKEINEKIDSINRQKEIIADNKENYNKFLVSDEEISKLDEQKLSLEKEL
ATMAKLEKDKKDFLKQIEDERNDIDNFFSRAKEKLHDNGLDQDIVAGIDNFTQIENATND
FLDETSTKIKDLGKDIISKNEDIVVFKQNIKACERPLEELGEIDNKCPVCQSDIDENKKK
ELVDQYSNDIETNKRLISENEEAVRLLTKNKESFEEKYDILLDLSKNIIEYKQKFNHLQS
EIYKLNEIDEKLESKEYISNKLGEIILLIANKKSERESCQESYDLYNQAQGALEVLGSVT
ELQYQLNQINNEIDNHVSSIKWVIEQDPHLSGDISEEELQDRINDLKQKNEEFNQLKGFV
KNKQSYLTQLDSIKEDIGMSINQIDIIKNKINASVYDEEKYEQIIYRSDMYERRYNTFNN
ELSEIKGRARETIVYVKDLTEKIEKADKFQQEYNDVSDYINLLNHIRSLYSKNGIQKDLR
NISRPLIQKYTKEFFNEFNFNYSDLTLDEEYDVTVYGPEGKSSMSMVSGGEKIAIALALR
LGITQAMSNGELDTILLDEPTIHLDNSRKHELINLLKEMSLLPQMIIVTHEAQLENAADN
LIKVEKVNGISNVIV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgattttcactaaattaaagttaattaatttcaaatctcatgaaaacacaatcattaaa
ttcgataaggggattagtgtaattgttggtgaaaatggtgctggtaagtccacaatttta
gagggcattagttttgccttatttaaacagcatacaggaaagaaaatcgatgatttggtt
aggaataatgcacaatcaatgttggttgaattgggatttacttccaatggcaggcaatat
aagattatccgtgagaaaaaatctaatttaacatcatcaatatataagaaaacttcagct
gatggagattatgttcatatctgcagcggagataaagaagtggctaatgaaattcgccag
attttagacattgactctgatttgttcttaaatgcaatttacataaggcaaggcgaaata
tcagagttggttgataagactcctgctgaaaagaaaaagctaatcggcaaattattgggt
atagattcacttgaaaaagcttggaataatttattgccattgattactgattatgaaaat
gaactctcagaacttaagggtaaattgtataattctgatgaattgaaggaaaatcttgaa
aagaaaaaagatgaattgaattccttaaaagaaagaggtcatgaattagaaaagaatatt
gaagaagtcaatgagttgcgcgatgaaatttctgaaagcaaacgtaatatggaacgtgaa
aaggagatttatgaagcccaatcaaataatttgatttctgaagaaaaaactttatctaaa
ttggaaaatgacaaacgtacagttcaagatgatttagataagatcaacaatgctgaagaa
gaaatcgaaagattggagaaatatgtatctaaactggatacttatcttgactttgaaaaa
tccgtaacaagcattcaaaacttgaaagaaaaagaaaaagaaatcaatgaaaagatagat
tctattaatcgtcaaaaagaaatcattgctgataataaagagaattataacaaatttttg
gtttccgatgaggaaatttctaaattggacgagcaaaagctgtcactcgaaaaagaattg
gcaacaatggctaaacttgaaaaagataaaaaggatttcttaaaacaaattgaagatgaa
agaaacgatattgataacttcttttcaagagctaaagaaaaattgcatgataatggttta
gatcaggatattgtcgccggaattgataattttacccagattgaaaatgcaactaatgat
ttccttgatgaaacttctacaaaaatcaaagatttaggtaaagacatcatatctaagaat
gaggatattgtagtattcaaacaaaatatcaaggcttgtgaaagaccattagaggaattg
ggtgaaattgataacaaatgtccggtatgtcaatcagacattgatgaaaataagaaaaaa
gagttagtggaccaatattctaatgacattgaaacaaataaacgattaatatctgaaaat
gaggaagctgtacgtttactcactaaaaataaagaaagctttgaagaaaaatatgatatt
ctgcttgacttgtcaaagaacatcattgaatataaacaaaaattcaatcatctgcaaagc
gaaatatacaaattgaatgaaattgatgaaaaacttgagtctaaagaatatattagcaac
aaattaggcgaaatcatacttttaatcgctaataaaaaatctgaacgagagtcatgtcaa
gaatcttatgacttatataatcaagcacagggagctttggaagttttgggtagtgtaacc
gagcttcaatatcaattaaatcaaatcaacaatgaaattgataatcatgtatccagcatt
aaatgggtcattgaacaggatcctcacttgagcggtgatattagtgaagaagagcttcaa
gatcgtataaatgatttgaaacagaaaaatgaggaatttaaccaactcaagggttttgtt
aaaaataaacaatcttatttaactcaattggattcaattaaagaggatattggaatgtct
atcaatcagattgacattatcaaaaataagattaatgcatctgtttatgatgaggaaaaa
tacgagcagataatctatcgttccgatatgtatgaaagaaggtataatacatttaataat
gaactttctgaaattaagggtagggctcgtgaaacaattgtatatgttaaagacttgact
gaaaaaatagaaaaggcagataagttccaacaagaatacaatgatgtttccgattacatc
aacctattgaaccatattagaagtttatatagtaaaaatggtattcaaaaagatttgaga
aatatttcaagaccattaatccagaaatatactaaggaattcttcaacgaatttaatttc
aactattctgatttgactcttgatgaggaatatgacgtgaccgtttatggtcctgaagga
aaatcatctatgagcatggttagtggcggtgaaaaaatagctatcgcattggctttaagg
ttgggtattactcaagccatgtccaatggcgaattggatactattttgttggatgagcct
acaattcatttggataactctagaaaacatgaattgattaacttattaaaggaaatgtct
ctattgccacaaatgattatcgtaactcatgaggctcagcttgaaaatgctgccgataat
ctaataaaagtagaaaaagttaatggaatttcaaatgtaatagtttaa
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