Methanobrevibacter sp. YE315: TL18_06135
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Entry
TL18_06135 CDS
T04279
Name
(GenBank) ribonuclease BN
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
meye
Methanobrevibacter sp. YE315
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meye03016
]
TL18_06135
Enzymes [BR:
meye01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TL18_06135
Transfer RNA biogenesis [BR:
meye03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TL18_06135
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AMD17634
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All DBs
Position
complement(1365286..1365801)
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AA seq
171 aa
AA seq
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MRGNLSNEIVSIKIEEGSKRPIALHEKSKFGKIEADTLNLSLIEACYLLEKGRLDIFEDD
IECSIGYIIDLLKEQDLYGKYIVYRDLKDRGFVIKTGFKYGSEFRLYNRGGGPGHSHSDY
LVKILFENYDINALDFASYVRVSHGVNKKLLLAIVDEDFDITYYNIEWTRP
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtaatttatctaatgaaattgtatctattaaaattgaagaaggaagtaaaagg
ccaatagctttgcatgaaaaaagtaagtttggtaaaattgaagcagatacattaaatctt
tctttaatcgaagcttgttatttattggaaaaaggccgtttggatatttttgaagatgat
attgaatgcagcatcggatatatcatagaccttttgaaagaacaggacctttatggaaag
tatattgtttatcgtgatttgaaagaccgtggatttgtaatcaagacaggctttaagtat
ggatccgaatttagattatataatcgtggagggggtccgggtcatagtcactccgattat
ctggtaaagattctatttgaaaattatgatattaatgcacttgattttgcaagttatgta
agggtttcacatggagttaataagaaacttcttttggctattgttgatgaggattttgat
attacctattataatattgagtggaccagaccataa
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