Methanobrevibacter sp. YE315: TL18_07345
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Entry
TL18_07345 CDS
T04279
Name
(GenBank) H/ACA RNA-protein complex component Cbf5p
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
meye
Methanobrevibacter sp. YE315
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meye03016
]
TL18_07345
Enzymes [BR:
meye01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TL18_07345
Transfer RNA biogenesis [BR:
meye03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TL18_07345
Prokaryotic type
TL18_07345
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
GnsAB_toxin
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AMD17850
LinkDB
All DBs
Position
complement(1631236..1632201)
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AA seq
321 aa
AA seq
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MKFDMVTKSKSFTSSDFGCKPEEREMSEYISKGVINLDKPSGPTSHEIDSWIKRILPVEK
SGHGGTLDPKVTGILPVGLDDATRAIQLLLTAPKEYVCLLTFHQDVPEERIREVFAEFTG
KIFQLPPVKSAVKRELRTRNIYYSTIYEIEGRDVLFRIGCEAGTYVRTYCHNIGEALGVG
AHMAELRRTQVGSFNEKNNLVTLQDVTDAYHFWIEDGDESFLRKAIMPMERAADYLPKIV
IKDSAVDAICHGADLACGGIAELADNIQKNDIVAIETLKGELVGAGHSLLNSNEILESDS
GFAVNVSKVFMKPDTYPRFWK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgatatggtaactaaatcaaaaagttttacttcatctgattttggatgtaag
cctgaagaaagggaaatgtctgaatatatttctaaaggtgttatcaatttggataagcca
tccggtccgacttctcatgaaatcgactcttggattaaaagaattttaccggttgagaaa
tctggacatggcggaacattggatcctaaggttaccggaattttgcctgtgggattggat
gatgcaacaagggctattcagttattgttaactgctcctaaggagtatgtttgtctttta
actttccaccaggatgttccagaagaaaggatacgtgaagtatttgccgaattcactggt
aagatattccaacttccacctgtaaaatctgctgtaaaacgtgaattgagaacacgtaac
atttattattcaacaatttatgaaattgaaggccgtgatgttttattcaggataggatgt
gaagctggaacttatgttagaacttattgtcacaatattggtgaagcattaggcgttgga
gcccatatggcagaacttagaagaacccaagtaggttctttcaatgaaaagaataatctc
gttacacttcaggatgtaactgacgcataccatttctggatagaggatggtgatgaatca
ttcttgcgtaaagccatcatgccgatggaacgggctgctgattatttgcctaaaatcgtt
attaaagactccgcagttgatgcaatatgccatggtgcggaccttgcatgcggaggtatt
gcagaattggcggataatattcaaaaaaatgatatcgttgcaattgaaactcttaaggga
gaattagttggagcaggtcattcattattgaattccaatgaaattttagaatcagattcc
ggttttgctgttaatgtttctaaagtgttcatgaaacctgatacatatccaagattctgg
aaatga
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