Methanobrevibacter sp. YE315: TL18_07965
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Entry
TL18_07965 CDS
T04279
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
meye
Methanobrevibacter sp. YE315
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meye03016
]
TL18_07965
Enzymes [BR:
meye01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TL18_07965
Transfer RNA biogenesis [BR:
meye03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TL18_07965
Prokaryotic type
TL18_07965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMD17965
UniProt:
A0A125RDK8
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All DBs
Position
complement(1735006..1735875)
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AA seq
289 aa
AA seq
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MKRTALKIGYIGTNFHGFQRQPNLRTVEEELIYHLRKLDYIDDLKKSRFRIAGRTDAGVH
SLGNVISFQSEKEVRVNEINNSLPDDIQILAKAPVRYAFKPRYAQMRQYRYMLFQDLDID
KLQECAEIFKGTHNFTNFTKRFQKTTTRTIDDIKITKVDLNDYHKKEFPNLHDTLSPIFV
DIYGESFLWNMVRKMMRVFVDVAIGKMDLDDVERLLNPGEDEPRAYIKVMEAEYLILMDI
QYDGIRFTYDDYACERFRRNLVDSLSDLQKRYAIRESMVKSLQDLHKGK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacagcactaaaaatcggatatatcgggactaattttcatggttttcaaaga
caacccaacttaagaacagtcgaagaagagttaatctatcatttgcgtaaacttgactac
attgatgacttaaaaaagtccagattcagaatagctggaagaactgatgctggcgttcac
agtttaggtaatgtcattagctttcagtctgaaaaggaagttagggtcaatgaaatcaat
aattcccttcctgatgatattcaaatattagcaaaggcgcctgtacgttatgcatttaag
cctagatatgcccaaatgagacagtatagatacatgctattccaagatttggatattgac
aaactccaagagtgtgctgaaatatttaagggaactcacaatttcacgaattttaccaag
aggttccaaaaaaccaccacaaggacaatcgatgacattaaaatcacaaaagttgatttg
aacgattatcacaaaaaggaattccctaaccttcatgataccctttctccgatatttgtg
gatatttatggcgaatcatttttatggaatatggtaagaaaaatgatgagggtatttgtt
gatgtggctattggaaaaatggatttggatgatgtggaaagattattaaatcctggagaa
gatgagccaagagcctacatcaaagtcatggaagccgaatatctaattttgatggatatt
caatatgatggaatcagattcacttatgatgattatgcatgcgaaagattcagacgtaat
cttgtcgattcattgtccgatttacaaaaaagatatgctattagagaatcaatggtaaaa
agtttacaggatttgcataaggggaaataa
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