Methanobrevibacter sp. YE315: TL18_10230
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Entry
TL18_10230 CDS
T04279
Name
(GenBank) phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meye
Methanobrevibacter sp. YE315
Pathway
meye03410
Base excision repair
meye03430
Mismatch repair
meye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TL18_10230
03430 Mismatch repair
TL18_10230
03440 Homologous recombination
TL18_10230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meye03400
]
TL18_10230
DNA repair and recombination proteins [BR:
meye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TL18_10230
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TL18_10230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TL18_10230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
AMD18352
UniProt:
A0A109UWB6
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Position
complement(2196722..2198056)
Genome browser
AA seq
444 aa
AA seq
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MLNRAKEATDVLKEHIEKDSVIRIISHNDADGISAAAVIANALAEENVQFHTTIIPRLKE
DIVNQLRHEKYDLFVFSDMGSPFIKQFNTYKHDVIVADHHQVDDTASESNVVHVNPHLFG
IDGSKDLCGAGSSYLTVRELDKKHLAYFALIGAFGDMQGQDGFTGVNKLIVDDALESGTL
EVHEDLKIVSKASEPIFKSLAYTFSPPLPKISGDLDGAREFLERRDLSYGIKFTDMEDEE
KDLLKEALISINPDIFGDCYTVPKEVPLLRDLEEYSYILDACGKNKKQGLGLSIALGERD
KALDAALKLQRQYRDQIVKGLEWVKKEGAQQLNSIQYLYSEDKVLKSVMGTIASIGLSVE
LLDDSKPVLGLSRLHKDIKISGRTTREMVAKGVNLGKALQDSSNNFGGTGGGHDIAAGAM
IPYESKDNFLHLVDEMVEYQLAND
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatagagctaaggaagctactgatgtgcttaaggagcacatcgaaaaggacagt
gttataagaataatttctcataacgatgctgatggaatttcagcagcagctgttatagcg
aatgctttggctgaagagaatgttcagttccacactacaattatccctcgccttaaggag
gatattgtaaatcagctaaggcatgaaaaatatgacttgttcgtattttcagatatgggc
agtccgttcattaagcaattcaatacctacaagcatgacgtaattgttgcagaccaccat
caggtggacgatactgcttccgaaagcaatgttgtccatgtcaatccgcatttgtttgga
attgatggaagtaaggatttgtgtggtgcaggttcaagctatctgactgtgcgtgaactt
gataaaaagcatttggcttactttgcattgattggtgcgtttggtgatatgcaaggccaa
gatggatttaccggtgtaaacaagttgattgttgatgatgcattggaaagcggtactctg
gaagttcatgaggacttgaaaattgtttcaaaagcttccgaaccgatttttaaatctttg
gcttacactttttcaccaccacttccaaaaatcagtggagatttggatggtgctcgtgaa
tttttagaacgtagggatttatcctacggaatcaaattcacagatatggaagacgaagaa
aaggatttgcttaaagaagctcttatttccattaacccggatattttcggggactgttat
actgttcctaaggaagttccgctcttgcgtgatttggaggaatattcctatattctcgat
gcatgtggtaaaaacaaaaagcaaggtcttggattaagcattgcacttggtgaaagggac
aaggcccttgatgcggcattaaaactgcaacgccaataccgcgatcaaatagttaaaggc
cttgaatgggttaaaaaggaaggtgctcaacaattgaatagtatccaatacttgtattct
gaagataaagttctcaaatcagtaatgggaactattgcaagcattggtttatcagttgag
ctattggatgactccaaaccggtacttggattgtcaagacttcataaggatattaagatt
tccggaagaaccactcgtgaaatggttgcaaaaggcgttaatttaggcaaggccttacag
gattcatcaaataattttggtggaaccggaggcggacatgacattgctgcaggcgctatg
attccttatgaaagcaaagacaatttcttgcacttggttgatgagatggttgaatatcaa
ttagcaaatgattag
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